Pairwise Alignments

Query, 285 a.a., HTH-type transcriptional activator RhaR from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 285 a.a., putative DNA-binding protein from Escherichia coli BL21

 Score =  579 bits (1493), Expect = e-170
 Identities = 282/285 (98%), Positives = 285/285 (100%)

Query: 1   MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG 60
           MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG
Sbjct: 1   MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG 60

Query: 61  NLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA 120
           NLLEAKQQR+VEGEMLFIPARAANLP+NNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA
Sbjct: 61  NLLEAKQQRMVEGEMLFIPARAANLPINNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA 120

Query: 121 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180
           RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCR+VVNMPPGNSQPRGD
Sbjct: 121 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRNVVNMPPGNSQPRGD 180

Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240
           FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM
Sbjct: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240

Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285
           ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG
Sbjct: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285