Pairwise Alignments

Query, 456 a.a., Exodeoxyribonuclease 7 large subunit from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 443 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  302 bits (773), Expect = 2e-86
 Identities = 176/444 (39%), Positives = 256/444 (57%), Gaps = 29/444 (6%)

Query: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRCAM 62
           P  +  ++ V  L + V   L      V + GE+S F++ ASGH YF+LKDDT QVRCAM
Sbjct: 23  PPAARRVWAVGPLMRAVADTLSARFNPVAVRGELSGFSRAASGHCYFSLKDDTGQVRCAM 82

Query: 63  FRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKLQ 122
           FR S  +++F P+ GQ V  R  + +Y  RGD Q+IVES+QPAG+G L +++ +LKA+L+
Sbjct: 83  FRRSADQLSFAPRDGQLVEARGKLDVYGARGDLQLIVESLQPAGQGALFEQFLKLKAQLE 142

Query: 123 AEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDAP 182
           AEGLF++  K+PLP+    +G++TS   AAL D++  LKRR P +PV IYP+AVQG  A 
Sbjct: 143 AEGLFEEARKRPLPAQPRSIGIVTSLGAAALRDVVTALKRRVPHIPVAIYPSAVQGMQAA 202

Query: 183 GQIVRAIELANQRN----ECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGH 238
            ++  A++ A +R+    E +VL++ RGGGSLEDLWSFND  + R I  + +PVV  VGH
Sbjct: 203 AELCTALQTAYRRHADTGESEVLLLVRGGGSLEDLWSFNDPALVRTIAQAPMPVVCGVGH 262

Query: 239 ETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRRFTQ 298
           ETD T+ADFVADLRAPTP+AAAE+ +  Q +   ++   ++RL   M   +  R +R  +
Sbjct: 263 ETDFTLADFVADLRAPTPTAAAELCAPTQVQRQGELSYLQERLNDGMYRDIDQRGQRLDR 322

Query: 299 IHHRLQQQHPQLRLARQQTMLERLKKRMSFALENQLKRAGQQQQRLTQRLNQQNPQPKIH 358
           +  RL +  P  R+   Q  L         +L++ L+R+G                  + 
Sbjct: 323 LTQRLGR--PSGRIHDSQRQLA--------SLQHALQRSGSL---------------ALQ 357

Query: 359 RAQTRIQQLEYRLAEILRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLK 418
           R    +Q L+ RL + L+  L   R+R     T L  + P   L RGY+  T   G  L 
Sbjct: 358 RHHNGLQTLQVRLPQALQRALEMQRQRLQRGQTALGLLDPQLVLQRGYAFLTDEQGMALT 417

Query: 419 KVKQVKAGEMLTTRLEDGWIESEV 442
           +  Q + G+ L   L DG ++  V
Sbjct: 418 RAAQARPGQALRATLADGALDVRV 441