Pairwise Alignments

Query, 318 a.a., Sigma-E factor regulatory protein RseB from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 321 a.a., Sigma factor AlgU regulatory protein MucB from Pseudomonas putida KT2440

 Score =  110 bits (275), Expect = 5e-29
 Identities = 91/319 (28%), Positives = 152/319 (47%), Gaps = 15/319 (4%)

Query: 8   MSLVTGSLLF--SANASATPASGALLQQMNLASQSLNYELSFISINKQGVESLRYRHARL 65
           +SL+ GS +   +  A+++P +   L ++  A Q  +Y+ SF+        S    H   
Sbjct: 7   LSLLIGSCMTVPALAANSSPEASEWLNKLAQAEQKQSYQGSFVYERNGSFSSHDIWHRVD 66

Query: 66  DNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLSPY 125
           D +   +LLQ+DG  +E+V+   ++      L           D+ P ++  D  +L  +
Sbjct: 67  DGKVSERLLQLDGAAQEIVRVDGKVECVSGALASGVTAPP---DTAPRVL--DPLKLMGW 121

Query: 126 YDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDTESKLPMRVDLLDRDGETLEQFRV 185
           YD    G++R+A R   +I +  RD  RY++ + +D  S LP+R  +L+  G+ LE+F++
Sbjct: 122 YDLSVAGKSRVAGRDAVIITLTPRDQHRYAFELHLDRHSGLPLRSLMLNDKGQLLERFQM 181

Query: 186 IAFNVNQDISSSMQTLAKANLPPLLSVPVGEK-AKFSWTPTWLPQGFSEVSSSRRPLPTM 244
              + + +I S       A   P+  V  G   A   W   WLP GF  V+SS R  P  
Sbjct: 182 TRLDTD-EIPSDADLRPGAACKPVQHVAAGSNDAVAGWRSDWLPPGFELVNSSVRRDP-K 239

Query: 245 DNMPIESRLYSDGLFSFSVNVNRATPSSTDQMLRTGRRTVSTSVRDNAE-----ITIVGE 299
            N  + S +Y DGL  FSV + + +      M      T + S R N       +T+VGE
Sbjct: 240 HNSSVSSLMYDDGLARFSVFIEQVSDDGGTDMRTQLGPTSAVSRRLNTPKGKVMVTVVGE 299

Query: 300 LPPQTAKRIAENIKFGAAQ 318
           +P  TA+R+A +++   AQ
Sbjct: 300 IPLGTAERVALSMRPQDAQ 318