Pairwise Alignments

Query, 553 a.a., DNA repair protein RecN from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 557 a.a., recombination and repair protein from Pseudomonas simiae WCS417

 Score =  454 bits (1168), Expect = e-132
 Identities = 246/554 (44%), Positives = 344/554 (62%), Gaps = 1/554 (0%)

Query: 1   MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAA 60
           ML  L++ N+AIV  L+++   GM+VITGETGAGKSI +DALGL LG RA++ +VR GA 
Sbjct: 1   MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGAD 60

Query: 61  RADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLREL 120
           +AD+ A F L D P A  WL E  L +   C+LRRVI+++GRSRG+INGT  PL  L+ L
Sbjct: 61  KADILATFDLADIPEAEAWLSERDLNNEGPCILRRVITAEGRSRGYINGTPCPLGDLKAL 120

Query: 121 GQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMTARYQLWHQSCRDLAHHQQLS 180
           G+LLI IH QH HQ L K +  + LLD YA  T L +++    Q W Q+ ++L       
Sbjct: 121 GELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVQLAAQRWRQTRQELERLSNSG 180

Query: 181 QERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMADGEDA 240
            E+ AR +LL YQL+EL        E EQ+++E+K L N+  LL   +  +   ++ +  
Sbjct: 181 DEQRARHQLLSYQLEELESLGLGETELEQLEQEHKNLTNAETLLGICRQVVEQCSESDSG 240

Query: 241 NLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQIAEASDELRHYCDRLDLDPNRLFE 300
           N+ + L  +   +S +      LS    +L  A IQ+ EA  EL  + D  D DP RL E
Sbjct: 241 NVLNALTASLNRLSSVNSGSGSLSEATTLLTSAQIQVEEAVGELNRFLDHFDADPARLQE 300

Query: 301 LEQRISKQISLARKHHVSPEALPQYYQSLLEEQQQLDDQADSQETLALAVTKHHQQALEI 360
           +E+R+    +LARKH + P  +    Q LL+E + L+   +S E L+  +    +   E 
Sbjct: 301 IEERLDTIYTLARKHRIQPTEVATMQQKLLDEIETLNANDESIERLSGELASFARHYQEK 360

Query: 361 ARALHQQRQQYAEELAQLITDSMHALSMPHGQFTIDVKFD-EHHLGADGADRIEFRVTTN 419
           AR L   RQQ A  LA  +   +  L MP G+FTI+++    + L   G +++E  V+ N
Sbjct: 361 ARELSDLRQQAATGLASAVELEIQRLGMPGGRFTIELRTSASNELQPHGLEQVELLVSAN 420

Query: 420 PGQPMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQ 479
           PGQP++ +AKVASGGELSRI+LAIQVITA+    P L+FDEVDVGI GPTA +VG+LLR+
Sbjct: 421 PGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR 480

Query: 480 LGESTQVMCVTHLPQVAGCGHQHYFVSKETDGAMTETHMQSLNKKARLQELARLLGGSEV 539
           LG+  QV+ VTHLPQVA  GHQH FV K      T T +  LNK  R++E+AR+LGG ++
Sbjct: 481 LGDRGQVLTVTHLPQVAAQGHQHLFVHKVRGSDATHTAVSKLNKSERVEEVARMLGGIDL 540

Query: 540 TRNTLANAKELLAA 553
           T+ +LA+AK+++ A
Sbjct: 541 TKESLAHAKKMVVA 554