Pairwise Alignments

Query, 553 a.a., DNA repair protein RecN from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 540 a.a., DNA repair protein RecN from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  370 bits (951), Expect = e-107
 Identities = 226/551 (41%), Positives = 331/551 (60%), Gaps = 15/551 (2%)

Query: 7   ISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAARADLCA 66
           + +F IV+ LE++  SG  V+TGETGAGKSI IDAL L LG R+++ +VR GAAR D+ A
Sbjct: 1   LRDFVIVQSLELELGSGFGVLTGETGAGKSILIDALQLALGSRSDSGVVREGAARCDIAA 60

Query: 67  RFSLKDTPAALR-WLEEN--QLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLRELGQL 123
            F   D PA+L  WLEE    +EDG   LLRR + ++GRSR +ING+A  ++QL+ L   
Sbjct: 61  EF---DAPASLTPWLEEQGFPVEDG--LLLRRTVDTEGRSRAWINGSAATVTQLKALADG 115

Query: 124 LIQIHGQHAHQLLTKPEHQKFLLDGYAN-ETSLLQEMTARYQLWHQSCRDLAHHQQLSQE 182
           L+ IHGQHA Q LT+ E  + LLD YA  +T+      A+   W Q  + L    +    
Sbjct: 116 LVDIHGQHAWQSLTRAEAVRDLLDAYAGIDTAPAARAWAQ---WRQRRKALDSATEKQNS 172

Query: 183 RAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMADGEDANL 242
               +E L +Q+ EL++ +PQ GE+E+++ ++ RLAN+  LL  +Q A A   D +D N 
Sbjct: 173 LQQESERLAWQIAELDKLSPQAGEWEELNTQHSRLANAQGLLDAAQIA-ANALDEDDTNA 231

Query: 243 QSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQIAEASDELRHYCDRLDLDPNRLFELE 302
            + ++ A   +     ++ + +  ++ LE A  Q+ +    L  Y    + DP  L  L+
Sbjct: 232 AALIHRALSALQAQAHIEPQFASAIEALEAALAQVQDTVHSLHQYSRHTERDPGSLEALD 291

Query: 303 QRISKQISLARKHHVSPEALPQYYQSLLEEQQQLDDQADSQETLALAVTKHHQQALEIAR 362
           QR+S  +SLAR++  +PE L + +     E  Q+D QA   E L  A     +      +
Sbjct: 292 QRLSLWVSLARRYRRTPEELAEVHAQWKTELAQID-QALDLEALQRAERADWKTFATALQ 350

Query: 363 ALHQQRQQYAEELAQLITDSMHALSMPHGQFTIDVKFDEHHLGADGADRIEFRVTTNPGQ 422
           A+ ++RQ+ A +L++ +T +M  L M  G F + +   E    A GA+++EFRV  + G 
Sbjct: 351 AISKERQKAAPKLSKAVTATMQTLGMQGGVFEVALLPLEEPQ-AHGAEQVEFRVAGHAGA 409

Query: 423 PMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGE 482
             +P+ KVASGGELSRIALAI V+T+R  + P LIFDEVD GI G  A  VG+LLRQLG+
Sbjct: 410 TPKPVGKVASGGELSRIALAISVVTSRLGQAPTLIFDEVDSGIGGAVAHTVGQLLRQLGK 469

Query: 483 STQVMCVTHLPQVAGCGHQHYFVSKETDGAMTETHMQSLNKKARLQELARLLGGSEVTRN 542
             QV+ VTHLPQVA C   H  VSK+  G  T++ ++ +   AR++ELAR+LGG E +  
Sbjct: 470 DRQVLAVTHLPQVAACADHHLLVSKQAVGRQTQSTVEPIATDARVRELARMLGGGEQSEI 529

Query: 543 TLANAKELLAA 553
           +LA+A+E+LAA
Sbjct: 530 SLAHAREMLAA 540