Pairwise Alignments

Query, 608 a.a., RecBCD enzyme subunit RecD from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 611 a.a., Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1009 bits (2609), Expect = 0.0
 Identities = 509/604 (84%), Positives = 547/604 (90%)

Query: 1   MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLEN 60
           M +Q++LLEAVE K LRP+D QFALTVAG++ PAVTLAAALLSHDAGEGHVCLPLSRL  
Sbjct: 1   MTIQERLLEAVEQKLLRPIDAQFALTVAGNDDPAVTLAAALLSHDAGEGHVCLPLSRLTL 60

Query: 61  NEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVA 120
            E +HPLL  C+SE     +W++ LLAS AVS GD P P+ILCG+RLYLNRMWCNERTVA
Sbjct: 61  TEEAHPLLVACISETATPIDWKKRLLASAAVSCGDSPAPLILCGERLYLNRMWCNERTVA 120

Query: 121 RFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTT 180
           RFFNEVN AI VDE  L++ LD LFP +DE+NWQKVAAAVALTRRISVISGGPGTGKTTT
Sbjct: 121 RFFNEVNQAIAVDEDQLSRILDALFPPTDEVNWQKVAAAVALTRRISVISGGPGTGKTTT 180

Query: 181 VAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTL 240
           VAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLG ALRQLPLTD QKKRIPEDASTL
Sbjct: 181 VAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGAALRQLPLTDAQKKRIPEDASTL 240

Query: 241 HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQ 300
           HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLID+LP H RVIFLGDRDQ
Sbjct: 241 HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDSLPPHGRVIFLGDRDQ 300

Query: 301 LASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYR 360
           LASVEAGAVLGDICAY NAGFTAERARQLSRLTG+ +PAG GT+AASLRDSLCLLQKSYR
Sbjct: 301 LASVEAGAVLGDICAYVNAGFTAERARQLSRLTGSAIPAGAGTQAASLRDSLCLLQKSYR 360

Query: 361 FGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLD 420
           FGSDSGIG+LAAAIN GD++A++ VFQQ F+DIEKR LQS +DY  ML+EALAGYGRYL 
Sbjct: 361 FGSDSGIGKLAAAINCGDRSAIQAVFQQGFSDIEKRTLQSSDDYAGMLDEALAGYGRYLR 420

Query: 421 LLQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGR 480
           LL  +A P+ I+QAFNEYQLLCALREGPFGV GLN+RIEQ M Q+RKI RHPHSRWYEGR
Sbjct: 421 LLHEKATPEAILQAFNEYQLLCALREGPFGVRGLNDRIEQAMVQQRKIQRHPHSRWYEGR 480

Query: 481 PVMIARNDSALGVFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHK 540
           PVMIARNDSALG+FNGDIGIALDRGQG RVWF MPDG IKSVQPSRLPEH+TTWAMTVHK
Sbjct: 481 PVMIARNDSALGLFNGDIGIALDRGQGLRVWFVMPDGTIKSVQPSRLPEHDTTWAMTVHK 540

Query: 541 SQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGL 600
           SQGSEFDHAALILPSQR+PVVTRELVYTAVTRARRRLSLYADERIL+ AI TRTERRSGL
Sbjct: 541 SQGSEFDHAALILPSQRSPVVTRELVYTAVTRARRRLSLYADERILAGAIVTRTERRSGL 600

Query: 601 AALF 604
           A LF
Sbjct: 601 ATLF 604