Pairwise Alignments

Query, 298 a.a., Tyrosine recombinase XerD from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas simiae WCS417

 Score =  345 bits (885), Expect = e-100
 Identities = 177/290 (61%), Positives = 215/290 (74%), Gaps = 1/290 (0%)

Query: 8   IEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGY 67
           I++FLDALWLEK L++NT  AYR DL++   WL  + L L  A  + +   LA RLE  Y
Sbjct: 9   IDRFLDALWLEKGLSDNTRQAYRSDLALFNGWLQEKNLELVNAGRELILDHLAWRLEQNY 68

Query: 68  KATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLI 127
           K  S+AR LS VR  ++YL REK    DP+  +  P+L + LPK LSEA VE LL AP +
Sbjct: 69  KPRSTARFLSGVRGFYRYLLREKLIAVDPTLQVDMPQLGRPLPKSLSEADVEALLAAPDL 128

Query: 128 DQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVY 187
            + +  RD+AMLEVLYA GLRV+EL+ LT+  ++LRQGV+RV+GKG+KERLVP+GEEA+ 
Sbjct: 129 SEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLVPMGEEAIV 188

Query: 188 WLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLR 247
           W+E Y+   R  LL G   DVLFPS R +QMTRQTFWHRIKH A +AGI  + LSPH LR
Sbjct: 189 WVERYMRDARSELLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGI-GKALSPHTLR 247

Query: 248 HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPR 297
           HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVA  RL+ +H +HHPR
Sbjct: 248 HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDMHAKHHPR 297