Pairwise Alignments

Query, 298 a.a., Tyrosine recombinase XerD from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 298 a.a., Tyrosine recombinase XerD from Pseudomonas putida KT2440

 Score =  362 bits (929), Expect = e-105
 Identities = 188/290 (64%), Positives = 222/290 (76%), Gaps = 1/290 (0%)

Query: 8   IEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGY 67
           I+QFLDALWLEK L++NT  +YR DL++   WL    ++L  A  D +   LA RL+ GY
Sbjct: 9   IDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQEHSVSLPDAGRDLILDHLAWRLDQGY 68

Query: 68  KATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLI 127
           K  S+AR LS +R  F+YL REK    DP+  +  P+L + LPK LSEA VE LLQAP +
Sbjct: 69  KPRSTARFLSGLRGFFRYLLREKLVAIDPTLQVDMPQLGKPLPKSLSEADVEALLQAPDL 128

Query: 128 DQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVY 187
            + +  RD+AMLEVLYA GLRV+ELV LT+  ++LRQGV+RV+GKG+KERLVP+GEEAV 
Sbjct: 129 GEAIGQRDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLRVMGKGSKERLVPMGEEAVV 188

Query: 188 WLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLR 247
           WLE Y   GR  LLNG   DVLFPSQR +QMTRQTFWHRIKH+A +AGID + LSPH LR
Sbjct: 189 WLERYQRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGID-KPLSPHTLR 247

Query: 248 HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPR 297
           HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVA  RL+QLH QHHPR
Sbjct: 248 HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPR 297