Pairwise Alignments

Query, 298 a.a., Tyrosine recombinase XerD from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 306 a.a., Tyrosine recombinase XerD from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  285 bits (730), Expect = 7e-82
 Identities = 151/291 (51%), Positives = 195/291 (67%), Gaps = 6/291 (2%)

Query: 11  FLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKAT 70
           F+D+LWLE+ L+ NTL+AYRRDL ++ +WL   G TL      DL    ++R     +AT
Sbjct: 17  FIDSLWLEEGLSRNTLDAYRRDLVLLGQWLAGHGKTLPETSEADLNQYFSDR-HAETRAT 75

Query: 71  SSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQP 130
           ++ R L+  +R F++  RE+  + DP+  L   + P R+PK +SEAQVE LL AP +  P
Sbjct: 76  TANRRLTVFKRYFRWALRERVIQVDPTLRLVPARQPLRVPKTMSEAQVEALLNAPDVGTP 135

Query: 131 LELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLE 190
           L LRD+ MLE++YA+GLRVSELV L    + + + V+R+ GKGNKERLVP G+ A  WL+
Sbjct: 136 LGLRDRCMLELIYASGLRVSELVTLKTWHVGMNEHVLRITGKGNKERLVPFGQLAGQWLQ 195

Query: 191 TYLEHGRPWLLNGVSIDVLFPSQR----AQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVL 246
            YL   R  +LNG   + LF + R     + MTR  FW  +K YA  AGI S  LSPH L
Sbjct: 196 RYLGQARVEILNGQQSEDLFVTSRGARAGEAMTRAMFWQLVKKYAAQAGITS-PLSPHTL 254

Query: 247 RHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPR 297
           RHAFATHLLNHGADLR VQMLLGH+D+STT IYTHVA ERL+ +  QHHPR
Sbjct: 255 RHAFATHLLNHGADLRAVQMLLGHADISTTTIYTHVARERLKSIVAQHHPR 305