Pairwise Alignments

Query, 714 a.a., Methylmalonyl-CoA mutase from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 548 a.a., Methylmalonyl-CoA mutase (EC 5.4.99.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  328 bits (840), Expect = 6e-94
 Identities = 201/514 (39%), Positives = 290/514 (56%), Gaps = 14/514 (2%)

Query: 32  GIAIKPLYTEADLDNL----EVTGTLPGLPPYVRGPRATMYTAQPWTIRQYAGFSTAKES 87
           GI IKPLYT  D        E  G  PG  PY RG  ATMY  + W+ RQ  G    ++ 
Sbjct: 26  GIGIKPLYTPQDQTGAAPYDEALG-YPGQYPYTRGIYATMYRGRSWSQRQLIGLGVPEDY 84

Query: 88  NAFYRRNLAAGQKGLSVAFDLATHRGYDSDNPRVAGDV-GKAGVAIDTVEDMKVLFDQIP 146
           N   +  L  G   LS+    +  RGYD+D+  V  ++ G  G  I+ VEDM+V  D +P
Sbjct: 85  NLRVKEILDLGASALSLIPCNSVFRGYDADD--VPSELLGTCGTVINHVEDMRVALDGVP 142

Query: 147 LDKMSVSMTMNGAVLPVLAFYIVAAEEQGVTPDKLTGTI-QNDILKEYLCRNTYI-YPPK 204
           + K+S +M  + +   +LAF +  A+ +GV   K+TGT  Q+D +  ++  + +     +
Sbjct: 143 IGKLSTAMN-DPSPFTLLAFELAVAKRRGVPWTKITGTSNQSDCISHFVANHMFFRLALQ 201

Query: 205 PSMRIIADIIAWCSGNMPRFNTISISGYHMGEAGANCVQQVAFTLADGIEYIKAAISAGL 264
            + R+I D IA+ + ++P +N +SI G HM +AGA   + +AFTL  GI+Y +  I++G+
Sbjct: 202 GARRVIVDHIAFANKHVPGWNPLSIVGQHMQQAGATPAEAMAFTLCSGIQYAEDCIASGM 261

Query: 265 KIDDFAPRLSFFFGIGMDLFMNVAMLRAARYLWSEAV-SGFGAQDPKSLALRTHCQTSGW 323
             D F PR +FFF + +  F  VA  RA R +W+      FGA+DP+S   + H QTSG 
Sbjct: 262 DPDQFLPRFTFFFDVSVSFFEEVAKFRAGRRIWARLCRERFGAKDPRSWRFKFHGQTSGV 321

Query: 324 SLTEQDPYNNVIRTTIEALAATLGGTQSLHTNAFDEALGLPTDFSARIARNTQIIIQEES 383
            LT Q P NNV R T +A+A   GG QSLHT+ +DE    PT  +ARIA  TQ I++EE+
Sbjct: 322 DLTRQQPLNNVARVTAQAMAGIFGGLQSLHTDGYDEVFSTPTAEAARIAVATQNILREEA 381

Query: 384 ELCRTVDPLAGSYYIESLTDQIVKQARAIIQQIDEAGGMAKAIEAGLPKRMIEEASAREQ 443
            L   +DPL GSYY+ESLT+ +  +  AII  IDEAGGM +A+E G+ +RMI E++   Q
Sbjct: 382 HLTDVIDPLGGSYYVESLTNDMETKINAIISMIDEAGGMYQAVEKGIVQRMIGESALAFQ 441

Query: 444 SLIDQGKRVIVGVNKYKLDHEDET-DVLEIDNVMVRNEQIASLERIRATRDDAAVTAALN 502
             +D G++ IVGVN Y+++ +  T   LE  +       +  L   + +R +A V  A+ 
Sbjct: 442 KKVDAGEQTIVGVNAYQVEEDPATYPSLEYPDAERMQSYLRRLADFKKSRSNADVDKAIA 501

Query: 503 ALTHAAQ-HNENLLAAAVNAARVRATLGEISDAL 535
           AL  +A     N+    V AA V AT GEI   L
Sbjct: 502 ALARSANTAKSNVFEHVVAAAEVGATHGEICGTL 535