Pairwise Alignments

Query, 629 a.a., ATP-dependent RNA helicase DeaD from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 567 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  430 bits (1105), Expect = e-125
 Identities = 242/572 (42%), Positives = 355/572 (62%), Gaps = 18/572 (3%)

Query: 3   EFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSL 62
           E ET FADLG+ A IL+A+  +GY +PS IQA+ IP +L G DV+G AQTG+GKTA+F +
Sbjct: 2   ENETLFADLGISAEILQAVEGMGYTQPSEIQAQSIPLMLEGHDVIGQAQTGTGKTASFGI 61

Query: 63  PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRAL 122
           P++  +D   K PQ L+L PTRELAVQV   +T  +K+ +G+   A+YGG+  D Q+R L
Sbjct: 62  PIVDRVDSSSKQPQALILCPTRELAVQVEGEITKLAKYKKGIFSTAIYGGEAIDRQIRTL 121

Query: 123 RQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQ 182
           ++G QIVVGTPGR++DH+ RGTL L  +  +VLDEADEML MGF ED+ET+++Q+PE  Q
Sbjct: 122 KRGVQIVVGTPGRVMDHMNRGTLKLDTVKTIVLDEADEMLDMGFREDIETVLSQMPEDRQ 181

Query: 183 TALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEA 242
           T  FSATM + I  +TR++   P+ V+IQ    T  +ISQ Y+ V    K E + R +  
Sbjct: 182 TIFFSATMAKPIMDLTRKYQTNPEIVKIQRKELTVENISQVYYEVKPPLKMELITRLINI 241

Query: 243 EDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIAT 302
             F+  ++F  TK AT EV E L   G  + AL+GD++QA R++ + + + G   +L+AT
Sbjct: 242 HQFNLGVVFCNTKRATDEVTEGLIARGIMAEALHGDLSQAQRDKVMNKFRKGHCTVLVAT 301

Query: 303 DVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRL-LRNIE 361
           DVAARG+DV+ + +V NYD+P+D E YVHRIGRTGRAGR+G A+ F+  R+    L+++E
Sbjct: 302 DVAARGIDVDNVEVVFNYDLPLDEEYYVHRIGRTGRAGRSGMAISFITGRKDIFRLKDLE 361

Query: 362 RTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQ-YRALLSKIQPTAEGEELD 420
           R +K T+ ++  P+   +  ++ ++   +V   L   + +Q + A L   Q  AEG  L 
Sbjct: 362 RYIKTTLTKMNPPSVAEMIDQKKDQLVKEVTTSLSKEEDNQVFEAALG--QMLAEG--LS 417

Query: 421 LETLAAALLKMAQGERTL-IVPPDAPMRPKREFRDRDDRG--PRDRNDRGPRGDREDRP- 476
           ++ +A  L+K+  G+    +   +  +   R+ RDR +RG   RDR +RG R  R DRP 
Sbjct: 418 MDQIALGLVKLQMGKSIQELSDMNFDLNLGRD-RDRGERGGRGRDRFERGGRKGRGDRPA 476

Query: 477 ------RRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHST 530
                  R RR+    +L+ + +G+ D +    IVGAIA E  IS R IG I +F + S 
Sbjct: 477 GRKGGRERGRREANMSRLF-LNLGKKDRIRPNDIVGAIAGEAGISGRLIGGIDIFDNFSF 535

Query: 531 IELPKGMPGEVLQHFTRTRILNKPMNMQLLGD 562
           +++P      V+    R  I  KP+NM+L  D
Sbjct: 536 VDVPSKDASHVINVMKRNTIKGKPVNMELSKD 567