Pairwise Alignments

Query, 329 a.a., Putative cryptic C4-dicarboxylate transporter DcuD from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 461 a.a., anaerobic C4-dicarboxylate transport from Escherichia coli BL21

 Score =  229 bits (585), Expect = 8e-65
 Identities = 119/324 (36%), Positives = 198/324 (61%), Gaps = 6/324 (1%)

Query: 1   MAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQVAG 60
           M+  ++SA+GLG+LLM TLFP +V++G+SR +A A+ A+  +I       + + AAQ + 
Sbjct: 130 MSLAVSSATGLGVLLMATLFPVMVNVGISRGAAAAICASPAAIILAPTSGDVVLAAQASE 189

Query: 61  MKIATYFFHYQLPVASCVIISVAISHFFVQRAFDKKDKNINHEQAEQKALDNVPPLYYAI 120
           M +  + F   LP++   II +AI+HFF QR  DKK+ +I+HE  +   +    P +YAI
Sbjct: 190 MSLIDFAFKTTLPISIAAIIGMAIAHFFWQRYLDKKE-HISHEMLDVSEITTTAPAFYAI 248

Query: 121 LPVMPLILMLGSLFLAHVGLMQSELHLVVVMLLSLTVTMFVEFFRKHNLRETMDDVQAFF 180
           LP  P+I +L        G    +LH++ ++++ + +   +EF R  N ++    ++  +
Sbjct: 249 LPFTPIIGVL-----IFDGKWGPQLHIITILVICMLIASILEFLRSFNTQKVFSGLEVAY 303

Query: 181 DGMGTQFANVVTLVVAGEIFAKGLTTIGTVDAVIRGAEHSGLGGIGVMIIMALVIAICAI 240
            GM   FANVV L+VA  +FA+GL+TIG + ++I  A   G   I +M+++ ++  + A+
Sbjct: 304 RGMADAFANVVMLLVAAGVFAQGLSTIGFIQSLISIATSFGSASIILMLVLVILTMLAAV 363

Query: 241 VMGSGNAPFMSFASLIPNIAAGLHVPAVVMIMPMHFATTLARAVSPITAVVVVTSGIAGV 300
             GSGNAPF +F  +IP +A    +    + +PM  A+ L R +SP++ VVV  +G+A +
Sbjct: 364 TTGSGNAPFYAFVEMIPKLAHSSGINPAYLTIPMLQASNLGRTLSPVSGVVVAVAGMAKI 423

Query: 301 SPFAVVKRTAIPMAVGFVVNMIAT 324
           SPF VVKRT++P+ VG V+ ++AT
Sbjct: 424 SPFEVVKRTSVPVLVGLVIVIVAT 447