Pairwise Alignments

Query, 455 a.a., Periplasmic pH-dependent serine endoprotease DegQ from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 382 a.a., Outer membrane stress sensor protease DegS from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  274 bits (700), Expect = 4e-78
 Identities = 143/307 (46%), Positives = 214/307 (69%), Gaps = 6/307 (1%)

Query: 52  AVVSVRV-EGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHV 110
           AVVS+   +   +  Q     F+ FFGD  P Q      GLGSGVI++ + GYVLTNNHV
Sbjct: 67  AVVSINTSKAPVNNPQSSDPWFRFFFGDQAPSQQQS---GLGSGVIVSPA-GYVLTNNHV 122

Query: 111 INQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVA 170
           I +A +I + LNDGR+  A++IG+D ++D+A+L+I N + L  I + +SD L +GD  +A
Sbjct: 123 IEEADEIEVILNDGRKSVAQVIGTDPETDLAILKI-NLTDLPVITLGNSDALEIGDQVLA 181

Query: 171 VGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINT 230
           +GNPFG+GQT TSGIVSALGR+ L +   ENFIQTDA+IN GNSGGAL++++G+L+GINT
Sbjct: 182 IGNPFGVGQTVTSGIVSALGRTQLGINTFENFIQTDAAINPGNSGGALVDVSGQLMGINT 241

Query: 231 AILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDVQR 290
           AI +  GGS+GIGFAIP++ AR++ + ++  G++ RG +G++  ++S ++A+ F +    
Sbjct: 242 AIYSRSGGSMGIGFAIPTSTARSVMEAIVKDGQVTRGWIGVEPQDLSPELAENFGMQPGT 301

Query: 291 GAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGK 350
           G  +S VL    +A+AG++ GD+IT++ G+P+N+ A+L S +A   PGT   L ++R   
Sbjct: 302 GVIISGVLQNGPAAQAGIRPGDVITAVAGRPVNNVAQLLSAVANLTPGTPASLDVVRRDG 361

Query: 351 PLEVEVT 357
             +VEVT
Sbjct: 362 KTKVEVT 368



 Score = 37.0 bits (84), Expect = 1e-06
 Identities = 18/45 (40%), Positives = 28/45 (62%)

Query: 389 GKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLA 433
           G G+ I  V++  PAAQAG++  DVI  V    VN++A++   +A
Sbjct: 300 GTGVIISGVLQNGPAAQAGIRPGDVITAVAGRPVNNVAQLLSAVA 344