Pairwise Alignments

Query, 489 a.a., Putative general secretion pathway protein A from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 571 a.a., General secretion pathway protein A from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 47.0 bits (110), Expect = 2e-09
 Identities = 85/429 (19%), Positives = 158/429 (36%), Gaps = 80/429 (18%)

Query: 101 LIIIENAHLNHRRILDDLQRAISLIPDGQFLLIGRPD------RKVERDFKKQGIELVSI 154
           L ++ N   N R++L             Q +LIG+P+      R       ++ I    +
Sbjct: 151 LRLLTNLETNERKLL-------------QIILIGQPELREVLARPELEQLAQRVIARFHL 197

Query: 155 GRLTEHELKASILEGQNID--QPDLLLTARVLKRIALLCRGDRRKMGLAGETIRLLQQAE 212
           G L E E +  I     +   +  L  +++ ++RI  + RG  R++ L  +  R L  A 
Sbjct: 198 GALNEAETRQYIQHRMQVAGLRGPLPFSSQAIQRIHEIARGVPRRVNLLCD--RALLGAY 255

Query: 213 QTSVFTAKQWRMIYRILGD--------NRPRKMQLAVVMS---------------GTIIA 249
            T+    ++  ++ +  G+         RPR+ Q A  ++               G ++A
Sbjct: 256 ATNQARVER-AVVEKAAGEVFETETPLTRPRRGQAAAPLAAWASPLGTLGLGLVVGALVA 314

Query: 250 LTCGWLLLSS----------------FTATLPVPAWLIPVTPVVKQDMTKDIAH------ 287
               W    S                   T P      PV P    D     A+      
Sbjct: 315 GALFWFWSHSAPRPTAAAPALPPAPTVAETAPATPVAAPVAPTTPADAPAPAANRPEPLP 374

Query: 288 -------VVMRDSEALSVLYGVWGYEVPADSAWCDQAVRAGLAC-KSGNASLQTLVDQNL 339
                  ++  ++EA   L  +WG  + +    C  A +  L C ++   +L  L   + 
Sbjct: 375 GPPEAAALLKNETEAWRELGPLWGQPLASGDP-CAAAQQVQLQCYRTDRMTLAGLRQLDR 433

Query: 340 PWIASLKVGDKKLPVVVVRVGEASVDVLVGQQTWTLTHKWFESVWTGDYLLLWKMSPEGE 399
           P I +L+       V+V  +   S  +  G Q W +       +W GD+  LW+  P   
Sbjct: 434 PGIITLRQTGGSGQVLVTALTGDSAMLQAGSQRWRMPLSALTDLWRGDFATLWRTPPGQT 493

Query: 400 STITRDSSEEEILWLETMLNRALHISTEPSAEWRPLLVEKIKQFQKSHHLKTDGVVGFST 459
           + +    +     WL   +   L  + +  A   P LV +I+ FQ+++ ++  G+ G  T
Sbjct: 494 TRLVDGRTGPAADWLGKRI-ADLQATGKVPASADP-LVARIQAFQRANGIEAAGLAGPIT 551

Query: 460 LVHLWQVAG 468
            + +   +G
Sbjct: 552 FMQVNLASG 560