Pairwise Alignments

Query, 308 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  327 bits (838), Expect = 2e-94
 Identities = 165/301 (54%), Positives = 222/301 (73%), Gaps = 1/301 (0%)

Query: 8   FLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGID 67
           FLQQ+ NG+TLGS Y LIAIGYTMVYGIIGMINFAHGEVYMI +Y++ + +A L   G++
Sbjct: 5   FLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVE 64

Query: 68  TGWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEG 127
           +  LL+    +  IV+   YG++IER+AY+P+RNS RL  LISAIG+S+ LQNY  +++G
Sbjct: 65  SFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQG 124

Query: 128 SRDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRAC 187
           +R   +P+L  G   V     F   +T  +  I +  F+ M  LT  I+Y+++GR CRA 
Sbjct: 125 ARQQGVPTLLEGAMRVEVGSGF-VQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRAT 183

Query: 188 AEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAV 247
            +D KMAS+LGINTDRVI+  FVIGA MAA+AGVL+   YG  + Y GF+ G+KAFTAAV
Sbjct: 184 QQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTAAV 243

Query: 248 LGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALLILVLLVMPTGILGRPEVEK 307
           LGGIGS+PGAM+GG+ILGI+E+L S  ++++YKDV SF+LL+++L+  P G+LGRP V K
Sbjct: 244 LGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRPLVAK 303

Query: 308 V 308
           V
Sbjct: 304 V 304