Pairwise Alignments

Query, 300 a.a., Dipeptide transport system permease protein DppC from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 268 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  241 bits (614), Expect = 2e-68
 Identities = 126/271 (46%), Positives = 174/271 (64%), Gaps = 6/271 (2%)

Query: 27  KRNKGAVVGLVYVVIVLFIAIFANWIAPYNPAEQFRDALLAPPAWQEGGSMAHLLGTDDV 86
           KRNK A+ GL+ V+    +AI A  +   +P      A+   P      S AH LGTDD+
Sbjct: 2   KRNKSALAGLIIVLFFAVLAIAAPILPIADPVATSWSAIRKAP------SAAHWLGTDDL 55

Query: 87  GRDVLSRLMYGARLSLLVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDIMLALPS 146
           GRD+LSR++YGAR SL+ G + V++++++GV  GLIAGYFGG VD +I R+ + +LA+P 
Sbjct: 56  GRDILSRMIYGARASLMAGVVSVMIAVVIGVPFGLIAGYFGGWVDMVISRITEALLAMPF 115

Query: 147 LLLALVLVAIFGPSIGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQ 206
           L++A+ L A  GPS+ NA +A+   A+P +VRLTR  VL     DYV  +R  G   +  
Sbjct: 116 LIMAIALAAFLGPSLTNAMIAIGLSAMPIFVRLTRGQVLAVKMEDYVEGARSIGLNHIDI 175

Query: 207 MFINIFPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAW 266
           M   I PN  AP+IVQA+L  + AI+  A+L FLG+G Q P P WG+ML+    F   A 
Sbjct: 176 MTRYILPNVFAPIIVQATLTVATAIIAEASLSFLGLGQQAPAPSWGSMLNTAKNFLSQAP 235

Query: 267 WVVTFPGLAILLTVLAFNLMGDGLRDALDPK 297
           W+  +PG+AI L V+ FNL+GDGLRDALDP+
Sbjct: 236 WMTLWPGIAIFLVVIGFNLLGDGLRDALDPR 266