Pairwise Alignments

Query, 219 a.a., putative lipoprotein YiaD from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 257 a.a., cell envelope biogenesis protein OmpA from Pseudomonas simiae WCS417

 Score =  178 bits (452), Expect = 7e-50
 Identities = 101/227 (44%), Positives = 137/227 (60%), Gaps = 14/227 (6%)

Query: 3   KRVYLIAAVVSGALAVSGCTT-NPYTGEREA---------GKSAIGAGLGSLVGAGIGAL 52
           +R+ ++A  V+    +SGC + NPY G  +           K+A   GLG+L GA  GA 
Sbjct: 5   RRLLVVATCVA---LLSGCASPNPYDGSSQGQASNESGGMSKTAKYGGLGALAGALAGA- 60

Query: 53  SSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPN 112
           +    +RGKGALIGA    A   G GYY D QE KLR+ M  TGV V R GD I L MP 
Sbjct: 61  AIDHNNRGKGALIGAVVAGAGAAGYGYYADQQEKKLRESMANTGVEVQRQGDQIKLIMPG 120

Query: 113 NVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSV 172
           N+TF ++S  +  +    L  +A  LK++ +  + ++GYTDSTG   LNM LSQ+RA SV
Sbjct: 121 NITFATNSDAISSSFYLPLNNLANSLKQFNQNTIQIVGYTDSTGSRQLNMDLSQRRAQSV 180

Query: 173 ASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL 219
           A+ L +QGV+ + +  +G GP NPIASN+   G+AQNRRVE+ L P+
Sbjct: 181 ANYLTSQGVNGANLSARGAGPDNPIASNADVNGRAQNRRVEVNLGPI 227