Pairwise Alignments

Query, 205 a.a., hypothetical protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 207 a.a., conserved inner membrane protein (NCBI) from Escherichia coli BW25113

 Score =  134 bits (336), Expect = 2e-36
 Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 2/206 (0%)

Query: 1   MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVK 60
           ML++ L +VG    A++G L AG+ RMD FGV+++   TA+GGG++RD+ L H P+ WVK
Sbjct: 1   MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVK 60

Query: 61  HPEYVIIVATAAVLTTIVAPVMPYLRKVFL-VLDALGLVVFSIIGAQVALDMGHGPIIAV 119
            P  +++    ++LT ++      L K  L VLDA+GL VF  IG   A +   GP+IAV
Sbjct: 61  DPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFVGIGVNKAFNAEAGPLIAV 120

Query: 120 VAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLYIALQHYVS-NHDVVIISTL 178
              V TGV GG++RD+  + IP++ + E+YA       +++    +  S   +   +  +
Sbjct: 121 CMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATAYYTFSVPLETASMMGM 180

Query: 179 VFGFFARLLALRLKLGLPVFYYSHEG 204
           V     RL A+R  L LP F     G
Sbjct: 181 VVTLLIRLAAIRWHLKLPTFALDENG 206