Pairwise Alignments

Query, 264 a.a., Inner membrane ABC transporter permease protein YdcV from Escherichia coli ECRC99

Subject, 281 a.a., putrescine ABC transporter permease PotI from Dickeya dadantii 3937

 Score =  145 bits (367), Expect = 7e-40
 Identities = 88/247 (35%), Positives = 141/247 (57%), Gaps = 11/247 (4%)

Query: 17  GVVFLHFPILIIAAYAFNTEDAAFSFPPQGLTLRWFSVAAQRSDILDAVTLSLKVAALAT 76
           G  FL+ P+L++  Y+FN+      +   G + +W+S   + S ++ AV LSL +AA + 
Sbjct: 19  GYSFLYAPMLMLVIYSFNSSRLVTVWA--GWSTQWYSALFEDSAMISAVALSLTIAAASA 76

Query: 77  LMALVLGTLAAAALWR-RDFFGKNAISLLLLLPIALPGIVTGLALLTAFKTIN------L 129
            MA+VLGTLAA  + R  +F G N  + +L  P+ +P ++TGL+LL  F ++        
Sbjct: 77  TMAVVLGTLAAVVMVRFGNFRGSNGFAFMLTAPLVMPDVITGLSLLLLFVSLAQAIGWPA 136

Query: 130 EPGFFTIVVGHATFCVVVVFNNVIARFRRTSWSLVEASMDLGANGWQTFRYVVLPNLSSA 189
           E G  TI + H TFC   V   + AR R    S+ EA+MDLGA   + F  + +P ++ A
Sbjct: 137 ERGMLTIWLAHVTFCSAYVTVVISARLREMDHSIEEAAMDLGATPLKVFFIITVPMIAPA 196

Query: 190 LLAGGMLAFALSFDEIIVTTFTAG-HERTLPLWLLNQLGRPRDVPVTNVVALLVMLVTTL 248
           L++G +LAF LS D++++ +F +G    TLP+ + + + R    P  N +A L++LV  +
Sbjct: 197 LVSGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSV-RMGVNPQINALASLILLVVGI 255

Query: 249 PILGAWW 255
             L AWW
Sbjct: 256 IGLIAWW 262