Pairwise Alignments

Query, 231 a.a., flagellar hook assembly protein FlgD from Escherichia coli ECRC99

Subject, 241 a.a., flagellar basal body rod modification protein FlgD from Pseudomonas simiae WCS417

 Score =  120 bits (301), Expect = 2e-32
 Identities = 78/219 (35%), Positives = 113/219 (51%), Gaps = 14/219 (6%)

Query: 17  TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76
           T +++  TG  +   + +FL LLV QLKNQ+P +P +N    +QLAQ S++ GI  LN +
Sbjct: 30  TDAANKATGKQSLG-KDAFLQLLVTQLKNQNPLSPQDNGAFVAQLAQFSSLEGINTLNDS 88

Query: 77  LGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTG-SEEGAVTTTTPFGVELQQAADKV 135
           + +IS    +SQ+LQAS+L+G  ++I     +  T  S  G+V  T         A   V
Sbjct: 89  VNAISSNFSSSQALQASSLVGRSIIIQTDKAMVDTSKSMTGSVDVTA--------ATGNV 140

Query: 136 TATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQ 195
           +  ITDK+G VVRTI++G  +AG  SF WDG    G  AP G+Y    +  N     VA 
Sbjct: 141 SVKITDKDGNVVRTIEMGAQSAGTQSFIWDGKNDKGEVAPAGTYTFNATTKNDKGDAVAL 200

Query: 196 PLQF-ALVQGVIRGNNGNTLDL---GTYGTTTLDEVRQI 230
                A V  V     G  + L   G  G+  L +++ I
Sbjct: 201 STSLPATVTSVTLSKTGGEMLLNLAGGMGSVKLSQIQTI 239