Pairwise Alignments

Query, 231 a.a., flagellar hook assembly protein FlgD from Escherichia coli ECRC99

Subject, 233 a.a., Flagellar basal-body rod modification protein FlgD from Pseudomonas putida KT2440

 Score =  118 bits (295), Expect = 1e-31
 Identities = 78/239 (32%), Positives = 127/239 (53%), Gaps = 17/239 (7%)

Query: 1   MSIAVTTTDP-----TNTGVSTTSSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMEN 54
           M+   +TTD      T+    T+ + S TG+  + L + +FL LLV Q++NQ+P +P EN
Sbjct: 1   MTTTNSTTDVGSAYLTSLQKQTSKTDSSTGAAGSALGKDAFLQLLVTQMQNQNPLDPQEN 60

Query: 55  NELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSE 114
            E  +QLAQ S++  ++ LN  +  I+  + +SQ+LQAS+L+G  V++     +  T  +
Sbjct: 61  GEFVAQLAQFSSLESMQSLNDAVTYIAAGLQSSQALQASSLVGRNVIVQTDKAVVDTSKD 120

Query: 115 -EGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGST 173
            +G+V  T+        ++   +  I DK+  +VRTI++G   +G   FTWDG   DG  
Sbjct: 121 MKGSVNLTS--------SSTSTSVGIYDKDDKLVRTIELGTQKSGSIDFTWDGLNDDGEV 172

Query: 174 APNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNNGN--TLDLGTYGTTTLDEVRQI 230
           A  G+Y    +AS  G          A V  V  G+NG+  TL+L   G+  L +++ I
Sbjct: 173 AAAGTYTFKATASIDGKATAMTTNLPASVTSVTMGSNGSEMTLNLAGLGSVALSKIQSI 231