Pairwise Alignments

Query, 231 a.a., flagellar hook assembly protein FlgD from Escherichia coli ECRC99

Subject, 222 a.a., Flagellar basal-body rod modification protein FlgD from Pseudomonas sp. S08-1

 Score =  115 bits (288), Expect = 7e-31
 Identities = 78/211 (36%), Positives = 107/211 (50%), Gaps = 13/211 (6%)

Query: 24  TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83
           TG +    ++ FL LLVAQL NQ+P  P EN E  +QLAQ S V GIE+LNT + S+   
Sbjct: 19  TGQSKELGKNEFLELLVAQLNNQNPLEPQENGEFIAQLAQFSQVEGIEQLNTRMESLLSG 78

Query: 84  IDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF--GVELQQAADKVTATITD 141
             +SQ+LQAS+L+G  V++P         SE+  V T+  F   + L   +  V   I D
Sbjct: 79  YQSSQALQASSLVGRKVIVP---------SEKAVVDTSETFKGSLVLPVTSSNVYVNIYD 129

Query: 142 KNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFAL 201
             G VV  +++G+  AG  SF WDG  + G+  P G+Y     A+          L  A 
Sbjct: 130 NAGKVVNRVNLGQQAAGNVSFMWDGKDSSGNLMPPGTYKFEAQATYADGTKGLYTLLPAN 189

Query: 202 VQGVIRGNNGN--TLDLGTYGTTTLDEVRQI 230
           V  V  G NG    L+L   G   L +V+ I
Sbjct: 190 VDSVALGQNGGEMKLNLAGIGAVPLSQVQII 220