Pairwise Alignments

Query, 586 a.a., 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO from Escherichia coli ECRC99

Subject, 586 a.a., FIG00638589: hypothetical protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1127 bits (2916), Expect = 0.0
 Identities = 546/586 (93%), Positives = 568/586 (96%)

Query: 1   MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG 60
           MTQTFIPGKDAALEDSIARFQQKL DLGF IEEASWLNPVPNVWSVHIRDKECALCFTNG
Sbjct: 1   MTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALCFTNG 60

Query: 61  KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEG 120
           KGATKKAALASALGEYFERLSTNYFFADFWLGET+ANGPFVHYPNEKWFPLTENDDVPEG
Sbjct: 61  KGATKKAALASALGEYFERLSTNYFFADFWLGETVANGPFVHYPNEKWFPLTENDDVPEG 120

Query: 121 LLDERLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVS 180
           LLD RLRAFYDPENELTGS LIDLQSGNE RG+CGLPFTRQSDNQTVYIPMNIIGNLYVS
Sbjct: 121 LLDARLRAFYDPENELTGSQLIDLQSGNEARGVCGLPFTRQSDNQTVYIPMNIIGNLYVS 180

Query: 181 NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE 240
           NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPA+V+ARYPAV+E+I TLEAE
Sbjct: 181 NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPAEVMARYPAVMESIATLEAE 240

Query: 241 GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL 300
           GFPIFAYDGSLGG+YPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
Sbjct: 241 GFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL 300

Query: 301 DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLM 360
           DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPF DW+FSGTTEEEFATLM
Sbjct: 301 DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFTDWSFSGTTEEEFATLM 360

Query: 361 AIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGS 420
           AIF  EDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANN+MGSHLRET+LSLPGS
Sbjct: 361 AIFAAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNNMGSHLRETLLSLPGS 420

Query: 421 EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQ 480
            W KEDYLNLIEQLDEEGFDDFTRVRELLGLATG+DNGWYTLR+GELKAMLALAGGDLEQ
Sbjct: 421 AWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGADNGWYTLRVGELKAMLALAGGDLEQ 480

Query: 481 ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAA 540
           AL+WTEWTMEFNSSVFSP RANYYRCLQTLLLL+QE+ RQPLQYLNAF++MYGA+AVEAA
Sbjct: 481 ALIWTEWTMEFNSSVFSPTRANYYRCLQTLLLLSQEDARQPLQYLNAFIKMYGAEAVEAA 540

Query: 541 SAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK 586
           SAA+SGEAAFYGL  VD DL AF AHQSLLKAY+KLQRAKAA+W+K
Sbjct: 541 SAALSGEAAFYGLPAVDHDLQAFPAHQSLLKAYDKLQRAKAAYWSK 586