Pairwise Alignments

Query, 285 a.a., AraC family transcriptional regulator from Escherichia coli ECRC99

Subject, 283 a.a., Right origin-binding protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  163 bits (413), Expect = 4e-45
 Identities = 96/285 (33%), Positives = 156/285 (54%), Gaps = 7/285 (2%)

Query: 2   IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 61
           +++ I+  +LE IE NLE  I IE +   +GYSRR++Q  F+    V +G+YIR+R+L R
Sbjct: 1   MKKAIIISVLEQIEKNLEERIDIEKLVVITGYSRRSLQDFFKEKCGVSIGKYIRQRKLSR 60

Query: 62  AAILVRLTAKSMLDIAISLHFDSQQSFSREFKKLFGCSPRVYRHRDYWDLANIFPSFLIR 121
           +A L++LT++S+ DIA  + FDS QS+SREFKK FG +P  YR  D+WDL N+ P + + 
Sbjct: 61  SATLLKLTSQSVTDIAFRMGFDSVQSYSREFKKTFGVNPNNYRKADFWDLRNLRPPYWLD 120

Query: 122 QQQKTECRLVNFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVST 181
             +  +  +       IFG    + I  +N  P +   ++   +   ++ +  ++Y +S+
Sbjct: 121 CDEHYQFEICQLTSKEIFGFQTSHQI-ATNDLPKKASPIKWKIIHETLRTWGENVYCLSS 179

Query: 182 FEPSTKSVDLLTVETFAGTVCKQTD-SEMPKEWTINRGLYASFRYEGEWEHYPEWARNLY 240
           F+P      ++ V +F G      D  ++P    I  G YA F + G  E Y +++  +Y
Sbjct: 180 FKPDNTKDQVIAVSSFFGMEHNSVDGGKIPMSRVIKCGKYAKFHFVGHKEQYQQFSNTIY 239

Query: 241 LMELPARGLARVNGSDIERFYYNEDFVEKDSND---VVCEIFIPV 282
           +  LP   L R  G DIE  Y++   V+K  N+   V    +IPV
Sbjct: 240 MCILPKLNLIRREGEDIE--YFHLASVQKQQNNESIVDLYYYIPV 282