Pairwise Alignments

Query, 253 a.a., Type VI secretion system protein TssL from Escherichia coli ECRC99

Subject, 291 a.a., putative type 4/6 secretion system from Pseudomonas putida KT2440

 Score =  150 bits (380), Expect = 2e-41
 Identities = 77/245 (31%), Positives = 130/245 (53%), Gaps = 4/245 (1%)

Query: 9   PPFTGYDEKSLRDYHLALHGNSLNPMIDAATPLLGMVMRLSTMNSQTMPEHLFAQVVTDV 68
           P + GY      D    L G   N M+DAA PL G+VMRL T++     + +  QV   +
Sbjct: 50  PAYQGYPA----DPEFQLRGGCANLMLDAAAPLFGLVMRLRTLDELPNIKDVHQQVRIQI 105

Query: 69  QAVEQLLQEQGYEPGVIISFRYILCTFIDEAALGNGWSNKNEWIKQSLLVHFHNEAWGGE 128
            ++ + +++ GYEP  ++++ Y LC +IDEA +   W   + W  + LL  FH+E WGGE
Sbjct: 106 DSIREEIRQHGYEPAQLLAYSYGLCLYIDEAVMERPWGKSSCWSHEPLLSIFHDETWGGE 165

Query: 129 KVFILLERLIREPKRYQDLLEFLWLCFSLGFRGRYKVAVQDQGEFEQIYRRLYHVLHKLR 188
           K+F ++ RL++EPKRYQD+LEF++    LG +G+Y +A + +     +  +L+ ++ +LR
Sbjct: 166 KIFTVITRLMQEPKRYQDVLEFMYFALCLGLKGKYALAPKGEETLNALIHQLHGIIRELR 225

Query: 189 GDAPFPLLHQDKKTQGGRYQLISRLTVKHIFCGGVVVLALFYLFYLLRLDSQTQDILHQL 248
           G  P  +           +++              + +A+ Y  Y  RL   T ++L  L
Sbjct: 226 GPTPEEVCDPYTNVAPRNFRMSRIWPWWSPLVISAIAMAVAYGIYSYRLHLITTEVLESL 285

Query: 249 NKLLR 253
           N +L+
Sbjct: 286 NGILQ 290