Pairwise Alignments

Query, 253 a.a., Type VI secretion system protein TssL from Escherichia coli ECRC99

Subject, 282 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  130 bits (326), Expect = 4e-35
 Identities = 72/240 (30%), Positives = 125/240 (52%), Gaps = 13/240 (5%)

Query: 21  DYHLALHGNSLNPMIDAATPLLGMVMRLSTMNSQTMPEHLFAQVVTDVQAVEQLLQEQGY 80
           D    L G   N M+DAA+ L G+V+RL T++     + +   V T +  + + +++ GY
Sbjct: 48  DPDFQLRGGYDNLMLDAASQLFGLVIRLRTLDDLPNIQFVHKTVQTQIGTIREEMRQHGY 107

Query: 81  EPGVIISFRYILCTFIDEAALGNGWSNKNEWIKQSLLVHFHNEAWGGEKVFILLERLIRE 140
                  + Y LC  +DEA +   W   + W  + LL  FH+E  GGEK+F+LLER+++ 
Sbjct: 108 CAVHQEVYSYALCLHLDEAVMTRPWGQNSCWSHEPLLSIFHDETQGGEKIFVLLERIMQS 167

Query: 141 PKRYQDLLEFLWLCFSLGFRGRYKVAVQDQGEFEQIYRRLYHVLHKLRGDAP-------F 193
           PK +QD+LEFL+ CF LG +G+Y +  +       +  R++ V+ +LRG  P        
Sbjct: 168 PKEFQDVLEFLYFCFCLGLQGKYALDPKGDEILRALISRMHKVIRQLRGPTPETVSDPYS 227

Query: 194 PLLHQDKKTQGGRYQLISRLTVKHIFCGGVVVLALFYLFYLLRLDSQTQDILHQLNKLLR 253
            ++H   + +  ++   + L +       V+ +   Y +Y  RLD  T +++  LN +L+
Sbjct: 228 NVVHCPHRMRRWQWPWWTPLVI------SVIAMVCAYSYYSYRLDLLTAEVVESLNAILQ 281