Pairwise Alignments

Query, 253 a.a., Type VI secretion system protein TssL from Escherichia coli ECRC99

Subject, 501 a.a., OmpA-like porin from Agrobacterium fabrum C58

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 2/236 (0%)

Query: 16  EKSLRDYHLALHGNSLNPMIDAATPLLGMVMRLSTMNSQTMPEHLFAQVVTDVQAVEQLL 75
           +K L  +H    G  +  ++ +A PLL +   L   +++  P+ L    V  +   E+ L
Sbjct: 59  DKLLTGFHFG--GEEVPTLVQSAAPLLNLAHLLRFSDAEPDPDQLRRACVEAITRYERDL 116

Query: 76  QEQGYEPGVIISFRYILCTFIDEAALGNGWSNKNEWIKQSLLVHFHNEAWGGEKVFILLE 135
                 P    +  Y++C  +D+  L   W  +  W +  L+  FHN+  GG++VF +L+
Sbjct: 117 ASARISPERARAAHYVVCATVDDVVLSKPWGVRAGWARSGLVSTFHNDVTGGDRVFDILD 176

Query: 136 RLIREPKRYQDLLEFLWLCFSLGFRGRYKVAVQDQGEFEQIYRRLYHVLHKLRGDAPFPL 195
              + P   +DLL  ++LC SL F GR +V+ +   E  +I   LY  L    G     L
Sbjct: 177 HFHQSPGANKDLLLLIYLCLSLAFEGRTRVSSKGALELSRIRDSLYKTLIGQYGTFEREL 236

Query: 196 LHQDKKTQGGRYQLISRLTVKHIFCGGVVVLALFYLFYLLRLDSQTQDILHQLNKL 251
               K        L +   +  +     +  AL YLF+ L L++ +     +L  L
Sbjct: 237 SPHWKGVDARHTPLRTMTALWTLLSLMALAFALGYLFFTLSLNNASDVTFERLAHL 292