Pairwise Alignments

Query, 385 a.a., DNA-binding transcriptional regulator CdaR from Escherichia coli ECRC99

Subject, 401 a.a., CdaR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 78/329 (23%), Positives = 134/329 (40%), Gaps = 38/329 (11%)

Query: 85  EGEIVGVIGLTGE------PENLRKYGELVCM-------TAEMMLEQSRLMHLLAQDSRL 131
           E ++ G++ LTG       P+ L    E   M       + +M+L    +   L Q  +L
Sbjct: 74  ERQVAGLVVLTGPAYIQAIPQRLLDAAEAAGMPLIEQPYSLKMVLVTQAIGSALIQSEQL 133

Query: 132 ---REELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQ 187
              R +++  L+  + ++   L   A +LG+ L     V  ++++  +L      A   +
Sbjct: 134 GRSRHDVLERLLTGDYQSLELLLHRATQLGMPLAGYWQVVQLQLEGNELLFAQGDAASVE 193

Query: 188 LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDVEDHRKRVEQLITRMKEYGQ---- 243
            Q A     R + V    L +     P     G+W V          +T  ++       
Sbjct: 194 AQLA-----RQHDVISRRLRQFSAGLPVQGRAGQWTVLLPAPDAVAALTNRQQLAHWLNP 248

Query: 244 LRFRVSLGNYFTG-------PGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD 296
           L  R++    F G       P  +A++   A+  +   ++    +    Y +L +  LL 
Sbjct: 249 LNLRLAPLKLFIGLSAAAHPPAHLAQAQDEARQALAAARRFSERAGLCVYDELGVLKLLS 308

Query: 297 SLRG----DWQANELARPLARLKAMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLE 352
            +R     D   NE   PL R   + +   +  TL AWF  N   +A ++ L +HRNTL 
Sbjct: 309 GVRDRALLDQFLNERLGPLLR-HDLHHGPNMMPTLEAWFHENGNLVAAAQRLAVHRNTLT 367

Query: 353 YRLNRISELTGLDLGNFDDRLLLYVALQL 381
           +R+ RI  L GL L N  DRL + +AL +
Sbjct: 368 HRVQRIEALCGLTLDNAYDRLDIGIALMI 396