Pairwise Alignments

Query, 536 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Escherichia coli ECRC99

Subject, 743 a.a., iron ABC transporter permease from Agrobacterium fabrum C58

 Score = 87.0 bits (214), Expect = 2e-21
 Identities = 100/491 (20%), Positives = 189/491 (38%), Gaps = 40/491 (8%)

Query: 63  AFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLA 122
           A ++A  S +  +  A    R RFP +  L  L  + +I P  V    +  ++GR G + 
Sbjct: 230 AIMTAAGSTILGLAFALVATRTRFPFKKGLRLLTILPIITPPFVIGLALTLLFGRAGVVT 289

Query: 123 SLCQSL-GLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRGW 181
               S+ G+E     YGL GI +A V    P++  +L+  +E +     + +  L    W
Sbjct: 290 EFMSSVFGIEPGRWLYGLTGIWIAQVLSFTPISFLVLIGVVEGVSPSMEEASQTLRADRW 349

Query: 182 HFFRFVEWPWLRRQIPPVTALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPA 241
             F  V  P ++  +     + F+   A F   L LGG     + E+  +  +    DP+
Sbjct: 350 RTFWRVSLPLMKPGLANAFLIGFIESMADFGNPLVLGGSHGVLSTEI-FFAVVGSQNDPS 408

Query: 242 RAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTMLIVLALLL 301
           RAA+LA++ ++C      ++QR   A   G          D   H  +  +M I +  L+
Sbjct: 409 RAAVLAIV-LLCFTLSAFIAQRFWLA---GKNFATVTGKGDSGAHIALPKSMSIAVHALV 464

Query: 302 LLPPLLAVIVDG---------------------------VNRQLPEVLAQPVLWQALWTS 334
           +   L  ++V G                           V+     +    V W + WT+
Sbjct: 465 VPWMLFTIVVYGMILVGGFVKTWGLDNTLTIEHYVRAFSVSLSNGSIAWTGVAWNSFWTT 524

Query: 335 LRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFLLL 394
           + IAL +  L   + ++  +    +  RQK       E + M+  A+PG V+   + +  
Sbjct: 525 MEIALISAPLTAAVGLLTAY----IIVRQKFAGRNLFEFALMMSFAIPGTVIGVSYIMAF 580

Query: 395 NNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVE 454
           N        +  I+I       +P  ++     M  +         +L    +  +++V 
Sbjct: 581 NLPPLEMTGSALILIACFVFRNMPVGVRGGIAAMSQLDKSLDEASLTLRANSFRTIRLVV 640

Query: 455 LRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALIL 514
           L  L+  +  AL ++ V +I     V    +  +     Y+   +G   + +  V     
Sbjct: 641 LPLLRPAIRAALVYSFVRAITSISAVIFLVSAQYNMATSYI---VGLVENGEYGVAIAYS 697

Query: 515 LLLCFLLFSVI 525
            +L  ++ +VI
Sbjct: 698 SMLIVVMITVI 708



 Score = 35.4 bits (80), Expect = 8e-06
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 418 PYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDF 477
           P +  VL   +  ++       Q+L  + W     V L  +K  LA A     + S+ DF
Sbjct: 320 PISFLVLIGVVEGVSPSMEEASQTLRADRWRTFWRVSLPLMKPGLANAFLIGFIESMADF 379

Query: 478 GVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFSVIEK---IPGRNVK 534
           G   + G           +  +GS ++       L ++LLCF L + I +   + G+N  
Sbjct: 380 GNPLVLGGSHGVLSTEIFFAVVGS-QNDPSRAAVLAIVLLCFTLSAFIAQRFWLAGKNFA 438

Query: 535 T 535
           T
Sbjct: 439 T 439