Pairwise Alignments

Query, 536 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Escherichia coli ECRC99

Subject, 541 a.a., ABC transporter, membrane spanning protein (thiamine) from Agrobacterium fabrum C58

 Score =  357 bits (917), Expect = e-103
 Identities = 216/517 (41%), Positives = 317/517 (61%), Gaps = 10/517 (1%)

Query: 13  LIPGVSA-ATLVVAVALAAFLALWWNAPQGDWSAVWQDSYLWHVVRFSFWQAFLSALLSV 71
           +I G +A A + + +ALA F  L ++   G  +A   D+Y   ++RF+ +QA LS LLS+
Sbjct: 11  IILGTAAFAAVFLFMALAVFALLSFDV--GASAAGVMDAYTLRILRFTLYQATLSTLLSI 68

Query: 72  VPAIFLARALYRRR-FPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLASLCQSLGL 130
              + +A AL RR+ FPGR+ ++RL A+ + LPV+V  FGI++++GRQG L S     G 
Sbjct: 69  ALGLPVALALARRKEFPGRIWIIRLMAVPMGLPVIVGAFGIITIWGRQGVLNSALVFAGA 128

Query: 131 EWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRGWHFFRFVEWP 190
           +  FS YGL GIL+AHVFFNLP++ RL+L  LE IPGE  ++AA LGM     FRF+EWP
Sbjct: 129 DEPFSIYGLSGILIAHVFFNLPLSVRLMLAGLERIPGEYWRMAASLGMGPVSVFRFIEWP 188

Query: 191 WLRRQIPPVTALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALIQ 250
            + R IP +  L+FMLC  SF  VL LGGGP ATT+E+AIYQAL +D+DP RA  L+++Q
Sbjct: 189 AVSRLIPGIAGLVFMLCATSFTLVLLLGGGPAATTLEVAIYQALRFDFDPQRAIALSVLQ 248

Query: 251 MVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDR-LHSRICDTMLIVLALLLLLPPLLAV 309
           +V    L+ L   L    A  ++L +  R  D R   +R+ D   IV A+ L+  PL+A+
Sbjct: 249 IVLTAVLLGLLAFLPSPEAEISSLGRNIRRFDGRTTGARLWDGAAIVFAVFLVGLPLVAI 308

Query: 310 IVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKM---- 365
            V G+   L  +L  P+  +A  TSL IA+ + +L V+  M ++ + + + +R+++    
Sbjct: 309 AVSGLQADLSRLLIAPIFLRAATTSLLIAMLSAILVVLCCMAIIGARQAIGSRRQLAWPF 368

Query: 366 -LAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVL 424
            L    L     L+L +P +VL +G+FLLL     +   A  +V   N LMA+P A++V+
Sbjct: 369 GLLSALLGAGSSLVLLVPPVVLGSGWFLLLRVFGDVSFYAPVLVALINMLMALPLAMRVM 428

Query: 425 ENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFG 484
           E        R   L  SLG++G+SRL+  +L  L RP+  AL+FA  LS+GD G VALFG
Sbjct: 429 EPAFTSHFLRTGRLSASLGLQGYSRLRFADLPVLWRPMLMALSFAMALSLGDLGAVALFG 488

Query: 485 NDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLL 521
           + +F TLP+ +Y  +GSYR+ D A  A +L ++C LL
Sbjct: 489 SKNFVTLPWLVYSNMGSYRTNDAAGYAFLLGVVCLLL 525