Pairwise Alignments

Query, 158 a.a., sigma D regulator from Escherichia coli ECRC99

Subject, 152 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score = 79.0 bits (193), Expect = 3e-20
 Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 15/161 (9%)

Query: 1   MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQS 60
           ML    N  ER  G +KL+D WL  R H LV  ++ +G KP     +  N + L DFC  
Sbjct: 1   MLESCQNAQERWGGVHKLIDSWLKAR-HELVRAFDALGAKP---EALAENREPLQDFCGV 56

Query: 61  LVDYLSAGHFSIYERILHKLEG---NGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDH 117
           LVDY+SAGHF +YE++  + E       L  A  I+P+++  T++++ + D       D 
Sbjct: 57  LVDYVSAGHFGVYEQLTKEAEAFDDQRGLELAETIYPRIDVITEKLLAFTD-----LCDA 111

Query: 118 DNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA 158
            N +  +    ++G  L  RF LED LI  VL  A  + PA
Sbjct: 112 GNCVAAK--FKELGALLHERFELEDCLI-EVLHNAHKEEPA 149