Pairwise Alignments

Query, 158 a.a., sigma D regulator from Escherichia coli ECRC99

Subject, 152 a.a., Regulator of sigma D from Pseudomonas sp. RS175

 Score = 75.9 bits (185), Expect = 3e-19
 Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 14/154 (9%)

Query: 1   MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQS 60
           ML    N  ER  G + L+DRWL  R H LV  Y+ +G KP      R   K L +FC  
Sbjct: 1   MLESCQNAQERWGGVHLLIDRWLQER-HELVRAYDALGDKPEALGESR---KPLQEFCGV 56

Query: 61  LVDYLSAGHFSIYERILHKLEGNGQ---LARAAKIWPQLEANTQQIMDYYDSSLETAIDH 117
           LVDY+SAGHF IYE++  + +       L  A +I+P+++  T++++ + D   E     
Sbjct: 57  LVDYVSAGHFEIYEQLTSEAKAFNDKRGLELAEQIYPRIDVITEKLLAFNDLCDEGKCVA 116

Query: 118 DNYLEFQQVLSDIGEALEARFVLEDKLILLVLDA 151
           + + E       +G  L  RF LED LI ++ +A
Sbjct: 117 EKFKE-------LGGLLHERFELEDCLIEVLHNA 143