Pairwise Alignments

Query, 158 a.a., sigma D regulator from Escherichia coli ECRC99

Subject, 162 a.a., Regulator of sigma D from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  282 bits (721), Expect = 2e-81
 Identities = 144/162 (88%), Positives = 148/162 (91%), Gaps = 4/162 (2%)

Query: 1   MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQS 60
           MLNQL+NLTERV GSNKLVDRWL VRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQS
Sbjct: 1   MLNQLENLTERVGGSNKLVDRWLDVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQS 60

Query: 61  LVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNY 120
           LVDYLSAGHFSIYERILHKLEGNGQL  AAKIWP LE NTQ+IMDYYD+SLETAIDHDN 
Sbjct: 61  LVDYLSAGHFSIYERILHKLEGNGQLLHAAKIWPLLEDNTQRIMDYYDTSLETAIDHDNC 120

Query: 121 LEFQQVLSDIGEALEARFVLEDKLILLVLDA----ARVKHPA 158
           LEFQQ LSDIGEALEARFVLEDKLI+LV DA    ARVK PA
Sbjct: 121 LEFQQALSDIGEALEARFVLEDKLIMLVFDAMHDGARVKRPA 162