Pairwise Alignments

Query, 356 a.a., fimbrial protein from Escherichia coli ECRC99

Subject, 335 a.a., Fimbriae-like adhesin SfmH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 63.9 bits (154), Expect = 6e-15
 Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 30/271 (11%)

Query: 92  LVLERTLNGLNYYALNDYLSVGVTIFIINNQYAAIPFEHLSNQSTSPQH--TCGAGNNGS 149
           L ++ T     Y  LNDYL   ++I            + ++     P++    G   N S
Sbjct: 86  LPVQSTEGNFKYLKLNDYLLGAMSIT-----------DSVAGVFYPPRNYILMGVDYNVS 134

Query: 150 TVNLDSGRSAKLSFYVR--HSITGTVTIPTTEVAWLYAGMSDHFPKTTPVSKVTIRGQLT 207
                  + +KL F ++        VTIP   +  +Y   S     +TPV  ++  G++ 
Sbjct: 135 QQKPFGVQDSKLVFKLKVIRPFINMVTIPRQTMFTVYVTTSTGDALSTPVYTISYSGKVE 194

Query: 208 APQNCELTPNQSIDVDFQKINSAEFSSTAGSIIAERKIKTEVTVSCTGMEDVRSTEVVSA 267
            PQNCE+   Q ++ DF  I ++ FS  AG+    + +  +         +V +   +S 
Sbjct: 195 VPQNCEVNAGQVVEFDFGDIGASLFSQ-AGAGNRPQGVTPQTKTIAIKCTNVAAQAYLSM 253

Query: 268 SMIAANRSADATMIVTSNPDVGIKIFDKNDRPV--NVDGGNLP--ADMGAISRLGKTDGS 323
            + A   S  A  +V+ NPD+G  + + N  P+  N     +P   D  A +R+G     
Sbjct: 254 RLEAEKASGQA--MVSDNPDLGFVVANSNGTPLTPNNLSSKIPFHLDDNAAARVG----- 306

Query: 324 VTFYSAPASLTGAKPAPDNGFTATATLVIEF 354
               + P S+TG KPA +  FTA   L +++
Sbjct: 307 --IRAWPISVTGIKPA-EGPFTARGYLRVDY 334