Pairwise Alignments

Query, 356 a.a., fimbrial protein from Escherichia coli ECRC99

Subject, 335 a.a., Fimbriae-like adhesin SfmH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 67.8 bits (164), Expect = 4e-16
 Identities = 62/224 (27%), Positives = 94/224 (41%), Gaps = 28/224 (12%)

Query: 147 NGSTVNLDSGRSAKLSFYVRHS-----------ITGTVTIPTTEVAWLYAGMSDHFPKTT 195
           N   +  D    A   FYVR S             GTV I    +  +Y   +   P T 
Sbjct: 123 NNVLMGYDENVKAGQPFYVRDSNLEFQLKIVKPFVGTVNISPKTMFNVYVMTAAGDPLTD 182

Query: 196 PVSKVTIRGQLTAPQNCELTPNQSIDVDFQKINSAEFSSTAGSIIAERKIKTEVTVSCTG 255
            V  +   G +T PQ+CE+   Q+I V+F  + S  F+         R  K  V V C+G
Sbjct: 183 VVYSILYSGTVTVPQSCEINAGQTILVNFGALYSGNFNHAGQKPEGVRAKKFSVPVKCSG 242

Query: 256 MEDVRSTEVVSASMIAANRSADATMIVTSNPDVGIKIFDKNDRPVNVDGGN--LPADMGA 313
           ++   S   ++  +IA   S     I + N DVG+         V  D GN  +P D+ +
Sbjct: 243 LD---SQVNLTMRLIATPDSHVPQAIASDNADVGV--------VVETDEGNALIPNDVQS 291

Query: 314 ISRL---GKTDGSVTFYSAPASLTGAKPAPDNGFTATATLVIEF 354
           ++          ++T  + P S TG  PA +  FTA A+L ++F
Sbjct: 292 VAPFITDSAGRANITLQAYPVSTTGETPA-EGAFTALASLRVDF 334