Pairwise Alignments

Query, 423 a.a., Inner membrane transport protein YhjV from Escherichia coli ECRC99

Subject, 443 a.a., predicted transporter (RefSeq) from Escherichia coli BW25113

 Score =  387 bits (994), Expect = e-112
 Identities = 187/412 (45%), Positives = 276/412 (66%), Gaps = 3/412 (0%)

Query: 11  QKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGLKGIWVFITAAIIAYPATWVVQDIYLK 70
           + + F   D GWV++ IGMAIGAG V +PVQ+GL G+WVF+ +++I YPA ++ Q +++ 
Sbjct: 29  EAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFIN 88

Query: 71  TLSESDSCNDYTDIISHYLGKNWGIFLGVIYFLMIIHGIFIYSLSVVFDSASYLKTFGLT 130
           TL+ES  C DY  +IS YLGKNWGI LG +YF+M++  +F+YS ++  DSASYL TFG+T
Sbjct: 89  TLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVT 148

Query: 131 DADLSQSLLYKVAIFAVLVAIASGGERLLFKISGPMVVVKVGIIVVFGFTMIPHWNFANI 190
           +  LS S  Y + +  +LVAI+S GE+LLFKIS  MV+ K+ ++   G +M+  W+  N+
Sbjct: 149 EGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNV 208

Query: 191 TAFPQASVFFRDVLLTIPFCFFSAVFIQVLNPMNIAYRKREADKVLATRLALRTHRISYI 250
            + P   +  ++ ++T+PF   S +FIQ L+PM I+YR RE    +A   ALR   I++ 
Sbjct: 209 GSLPPLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFG 268

Query: 251 TLIAVILFFAFSFTFSISHEEAVSAFEQNISALALAAQVIPGH---IIHITSTVLNIFAV 307
            L   + F+A SFT ++ H+EAV A+EQNISALA+AAQ I G     + + S +LNIFAV
Sbjct: 269 ILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAV 328

Query: 308 LTAFFGIYLGFHEAIKGIILNLLSRIIDTKKINSRVLTLAICAFIVITLTIWVSFRVSVL 367
           +TAFFG+YLGF EA +GI++N+L R +  +KIN  ++   I  F ++     +     VL
Sbjct: 329 MTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVL 388

Query: 368 VFFQLGSPLYGIVSCLIPFFLIYKVAQLEKLRGFKTWLILLYGILLCLSPLL 419
            F  + SP++G+V CLIP +L+YKV  L K +G   +LI++ G+LLC+SP L
Sbjct: 389 SFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFL 440