Pairwise Alignments

Query, 299 a.a., MFS transporter from Escherichia coli ECRC99

Subject, 438 a.a., shikimate transporter (NCBI) from Escherichia coli BW25113

 Score =  148 bits (373), Expect = 3e-40
 Identities = 102/299 (34%), Positives = 155/299 (51%), Gaps = 14/299 (4%)

Query: 4   GAALLATENAPPRKRALYGSFPQLGAPIGFFFANGTFLLLSWLLTDEQFMSWGWRVPFIF 63
           GAALL+ E+AP  K+A Y S  Q+G  +G   + G   L+S + TDEQF+SWGWR+PF+F
Sbjct: 145 GAALLSVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLF 204

Query: 64  SAVLVIIGLYVRVSLHESPVFEK----VAKAKKQVKIPLGTLLTKHVRVTVLGTFIMLAT 119
           S VLV+  L+VR  + ES  FE+     A AKK  +IP+   L +H    +    + L  
Sbjct: 205 SIVLVLGALWVRNGMEESAEFEQQQHYQAAAKK--RIPVIEALLRHPGAFLKIIALRLCE 262

Query: 120 YTLFYIMTVYSMTFSTAAAPVGLGLPRNEVLWMLMMAVIGFGVM-VPVAGLLADAFGRRK 178
               YI+T +++ +ST      +GLPR E+   + + V G   + +P    LAD FGRR+
Sbjct: 263 LLTMYIVTAFALNYSTQ----NMGLPR-ELFLNIGLLVGGLSCLTIPCFAWLADRFGRRR 317

Query: 179 SMVIITTLIILFALFAFNPLLGSGNPILVFAFLLLGLSLMGLTFGPMGALLPELFPTEVR 238
             +  T +  L A   F  L       +VF  ++L      +       +  E+F    R
Sbjct: 318 VYITGTLIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYR 377

Query: 239 YTGASFSYNVASILGASVAPYIAAWLQTNY--GLSAVGLYLAAMAGLTLIALLLTHETR 295
           Y+GA   Y VAS++G    P+IAA L T +     +V +YL A   ++ +  LL  +++
Sbjct: 378 YSGAGVGYQVASVVGGGFTPFIAAALITYFAGNWHSVAIYLLAGCLISAMTALLMKDSQ 436