Pairwise Alignments

Query, 311 a.a., DNA-binding transcriptional regulator LysR from Escherichia coli ECRC99

Subject, 326 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  115 bits (287), Expect = 2e-30
 Identities = 82/286 (28%), Positives = 134/286 (46%), Gaps = 4/286 (1%)

Query: 1   MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKLFERVRGRLHP 60
           M A+ +R +E F AVM+AGS+T AA LL  SQ  V+R +   E  +G  LF+R   R+ P
Sbjct: 1   MIAMEIRELEAFLAVMSAGSITGAARLLDRSQSQVTRLIQDLETSLGFPLFDRNGPRITP 60

Query: 61  TVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLPVFSQSFLPQLLQ--PFLV 118
           + +G+    E +R   G++ + + A+ +       + IA  P F+   +P  L   P  +
Sbjct: 61  SDKGVAFHAEAERFISGIEHLRNRAQRISLKEPEPVEIAATPAFATGMVPLALAELPEAL 120

Query: 119 RYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERTELLSLDELCVLPPGHPL 178
               V L  +P E+ +  + +  +  D  +T       G E           VL    PL
Sbjct: 121 LPHTVFLRSMPAEAAV--QAVLGRTADFCVTSLPAEQPGLEAHGYFQGRCAAVLSVNDPL 178

Query: 179 AVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKRRMIVETHSAASVCAMVRAGV 238
           A K V++  D   +  I+L+     R+ +D+   E  V+ R I+ T +A S   +   G+
Sbjct: 179 AAKDVVSISDLADQTIITLANPFRLRRRVDKALQEANVRARRIIATSAAMSAVQVASTGM 238

Query: 239 GVSVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLHRPSSALVQ 284
           G+++V P TA     +G+ VR   + +PF   +     RP SA  Q
Sbjct: 239 GIAIVEPATAYGPLTAGVTVRPLDVDIPFLWGIFSATARPLSATAQ 284