Pairwise Alignments

Query, 187 a.a., fimbrial protein from Escherichia coli ECRC99

Subject, 186 a.a., Major fimbrial subunit StfA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  113 bits (282), Expect = 2e-30
 Identities = 74/191 (38%), Positives = 101/191 (52%), Gaps = 9/191 (4%)

Query: 1   MSKFVKTAIAATMVMGAFASTSTIAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIG 60
           M+  VK A+AA +VMG  +S +  A  N GT  F GTIEDSPCSIV  D    V++G IG
Sbjct: 1   MNTAVKAAVAAALVMGV-SSFANAAGSNTGTVTFTGTIEDSPCSIVVGDEHQTVNLGHIG 59

Query: 61  SGILKNNGTSTPKAFQIHLQDCVFDTQTTMTTTFT--GNASSTNSGNYYTIYNTDTGAAF 118
           +G L     S+   F I L++C F T+   +T F+  GN SS N G+   +     G   
Sbjct: 60  TGSLMGGKESSKVDFHIGLENCAFTTEKEASTVFSAIGNESSANPGSVALM--RIGGGEM 117

Query: 119 NNVSLAIGDAQGTSYKSGAGIEQKIVNDTATNKGKAKQTLDFKAWLVG--AADAPDLGNF 176
              S+ IG+  G++ K G    + +  + +     AKQTL+FKAW+ G  AA   D G F
Sbjct: 118 AGSSIVIGNHLGSAIKLGDAYSENLTMNGSV--AAAKQTLNFKAWVKGDSAATTIDTGEF 175

Query: 177 EANTTFQIIYL 187
            +   F I YL
Sbjct: 176 SSTVNFTISYL 186