Pairwise Alignments

Query, 260 a.a., histidine ABC transporter substrate-binding protein HisJ from Escherichia coli ECRC99

Subject, 260 a.a., lysine/arginine/ornithine transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  366 bits (940), Expect = e-106
 Identities = 175/259 (67%), Positives = 217/259 (83%)

Query: 1   MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNSQGELVGFDIDLAKELC 60
           MKK +L+LSL++  S+A +++AA+P+ +RIGTD TYAPF SK+++G+ VGFDIDL  E+C
Sbjct: 1   MKKSILALSLLVGLSTAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60

Query: 61  KRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAADSRLVVAK 120
           KR+  +CT+V +  DALIPSLKAKKIDAI+SSLSIT+KRQQEIAF+DKLYAADSRL+ AK
Sbjct: 61  KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120

Query: 121 NSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAA 180
            S IQPT++SLKGK VGVLQG+TQE + NE W  KG+++V+Y  QD +YSDL AGR+DAA
Sbjct: 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180

Query: 181 FQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMR 240
            QDEVAASEGFLKQP GKD+ F G SVKD+K FG GTG+GLRK+D EL  A NKA  E+R
Sbjct: 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240

Query: 241 ADGTYEKLAKKYFDFDVYG 259
            DGTY+K+AKKYFDF+VYG
Sbjct: 241 QDGTYDKMAKKYFDFNVYG 259