Pairwise Alignments

Query, 393 a.a., sugar efflux transporter SetB from Escherichia coli ECRC99

Subject, 394 a.a., putative arabinose efflux transporter from Escherichia coli BL21

 Score =  572 bits (1475), Expect = e-168
 Identities = 280/390 (71%), Positives = 330/390 (84%), Gaps = 2/390 (0%)

Query: 6   AVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGV 65
           A + +K  DLT+ AFL+VAFLTGIAGALQTPTLSIFL DE+ ARP MVGFFFTGSA++G+
Sbjct: 5   ATTPSKILDLTAAAFLLVAFLTGIAGALQTPTLSIFLADELKARPIMVGFFFTGSAIMGI 64

Query: 66  LVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQ 125
           LVSQFLA  SDK+GDRK LI+ CCL GVLACTLFAWNRNYF+LL  GV LSSF STANPQ
Sbjct: 65  LVSQFLARHSDKQGDRKLLILLCCLFGVLACTLFAWNRNYFILLSTGVLLSSFASTANPQ 124

Query: 126 MFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIV 185
           MFALAREHAD+TGRE VMFS+FLRAQ+SLAWVIGPPLAY LAMGFSF VMYL+AA+AF+V
Sbjct: 125 MFALAREHADRTGRETVMFSTFLRAQISLAWVIGPPLAYELAMGFSFKVMYLTAAIAFVV 184

Query: 186 CGVMVWLFLPSMQKELPLATGTVE--APRRNRRDTLLLFVICTLMWGSNSLYIINMPLFI 243
           CG++VWLFLPS+Q+ +P+ T  VE       +RDT LLFV+C++MW +N+LY+INMPLFI
Sbjct: 185 CGLIVWLFLPSIQRNIPVVTQPVEILPSTHRKRDTRLLFVVCSMMWAANNLYMINMPLFI 244

Query: 244 INELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVGGVCFYAGMLMAH 303
           I+ELHL +KLAG M+G AAGLEIP MLIAGY+ KR+GKR LM +A V G+CFYA +LMA 
Sbjct: 245 IDELHLTDKLAGEMIGIAAGLEIPMMLIAGYYMKRIGKRLLMLIAIVSGMCFYASVLMAT 304

Query: 304 SPVILLGLQLLNAIFIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSVAGIV 363
           +P + L LQ+LNAIF+GIL GIGMLYFQDLMP + GSATTLY NTSRVGWIIAGSV GI+
Sbjct: 305 TPAVELELQILNAIFLGILCGIGMLYFQDLMPEKIGSATTLYANTSRVGWIIAGSVDGIM 364

Query: 364 AEIWNYHAVFWFAMVMIIATLFCLLRIKDV 393
            EIW+YHA+FW A+ M+   + CLL IKD+
Sbjct: 365 VEIWSYHALFWLAIGMLGIAMICLLFIKDI 394