Pairwise Alignments

Query, 313 a.a., pseudouridine kinase from Escherichia coli ECRC99

Subject, 309 a.a., ribokinase (NCBI) from Escherichia coli BW25113

 Score = 86.7 bits (213), Expect = 7e-22
 Identities = 70/296 (23%), Positives = 132/296 (44%), Gaps = 17/296 (5%)

Query: 1   MREKDYVVIIGSANIDVAGYSHESLNYADSNPGKI------KFTPGGVGRNIAQNLALLG 54
           M+    +V++GS N D     H     +   PG+       +   GG G N A      G
Sbjct: 1   MQNAGSLVVLGSINAD-----HILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSG 55

Query: 55  NKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDM 114
                ++  G D  G+S+  Q     + +    ++ GE+T   L  ++  GE ++ I+  
Sbjct: 56  ANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIH-A 114

Query: 115 NISNAITAEYLAQHREFIQRAKVIVADCNISEEAL--AWILDNAANVPVFVDPVSAWKCV 172
             + A++   +   RE I  A  ++       E++  A  + +     V ++P  A +  
Sbjct: 115 GANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELP 174

Query: 173 KVRERLSQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDGVYYS 232
              E L+ +  + PN  EAE L+GI +   ED AK A   H+ G+  +++++G  GV+ S
Sbjct: 175 D--ELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWAS 232

Query: 233 DISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSSMALS 288
            ++GE       +   ++   AGD     L +  ++  P  E++RFA   +++A++
Sbjct: 233 -VNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVT 287