Pairwise Alignments

Query, 412 a.a., NAD-dependent dihydropyrimidine dehydrogenase subunit PreT from Escherichia coli ECRC99

Subject, 659 a.a., fused predicted oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit (NCBI) from Escherichia coli BW25113

 Score =  194 bits (493), Expect = 7e-54
 Identities = 144/448 (32%), Positives = 208/448 (46%), Gaps = 54/448 (12%)

Query: 8   DELTPAFTPLLAIKEASRCLLCHD-APCSQACPAQTDPGKFIRSIYFRNFKGAAETIREN 66
           DE+   F    A +EASRCL C + + C   CP      ++I  +   N   A E   + 
Sbjct: 209 DEIYLPFRADQAQREASRCLKCGEHSVCEWTCPLHNHIPQWIELVKAGNIDAAVELSHQT 268

Query: 67  NALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPG----TK 122
           N L  +  RVCP ++LC+  CT       + IG ++R+++D     G   ++P     TK
Sbjct: 269 NTLPEITGRVCPQDRLCEGACTIRDEHGAVTIGNIERYISDQALAKG---WRPDLSHVTK 325

Query: 123 TLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAHPGGWLRNGIPQFRLPQSVLDAEIA 182
              +VAIIGAGPAGL  +  LT  G  VT+Y++    GG L  GIP F+L +S+L     
Sbjct: 326 VDKRVAIIGAGPAGLACADVLTRNGVGVTVYDRHPEIGGLLTFGIPSFKLDKSLLARRRE 385

Query: 183 RIEKMGVTIKCNNEIGKTLTLEQLKAENRAVLVTVGL--SSGSGLPLFEHSDVEIAVDFL 240
               MG+  + N E+GK ++L+ L  +  AV V VG   S  +GLP  +   V  A+ FL
Sbjct: 386 IFSAMGIHFELNCEVGKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFL 445

Query: 241 L-RARQAQGDISIPQ---------SALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDE 290
           +   +Q  G   +P+         + +++GGGD AMD   T    G   VTC  R +   
Sbjct: 446 IANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEAN 505

Query: 291 FPASEKEFASARELGVSIIDGFTPVAVEGNK------VTFKHVRL--------------- 329
            P S+KE  +ARE G +      PVA+E N+      + F   RL               
Sbjct: 506 MPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRRPVPVE 565

Query: 330 SGELTMAADKIILAVGQHARLDDFAKLEPQRNTI-----------KTQNYQTRDPQVFAA 378
             E  M AD +I+A G +        LE    T+               YQT +P++FA 
Sbjct: 566 GSEFVMPADAVIMAFGFNPH--GMPWLESHGVTVDKWGRIIADVESQYRYQTTNPKIFAG 623

Query: 379 GDIVEGDKTVVYAVKTGKEAAEAIHHYL 406
           GD V G   VV A+  G+ AA+ I  +L
Sbjct: 624 GDAVRGADLVVTAMAEGRHAAQGIIDWL 651



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 21 KEASRCLLCHDAPCSQACP 39
          + A  C  C DAPC+++CP
Sbjct: 51 RSAVTCHHCEDAPCARSCP 69