Pairwise Alignments

Query, 261 a.a., flagellar type III secretion system protein FliR from Escherichia coli ECRC99

Subject, 260 a.a., Flagellar biosynthesis protein FliR from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  129 bits (323), Expect = 8e-35
 Identities = 72/250 (28%), Positives = 134/250 (53%), Gaps = 2/250 (0%)

Query: 8   QWLSWLSLYFWPLLRVLALISTAPILSERSVPKRVKLGLAMMITFAIAP-SLPANDVPVF 66
           Q L+ L   +WP +R+LA++S  P++ E  VP  V++ LA+ +   + P + P   +  F
Sbjct: 10  QLLATLLAMWWPFVRLLAMLSFMPVVGENMVPVTVRVLLALALAVVLLPVAQPPVPITPF 69

Query: 67  SFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEIIGLQMGLSFATFVDPASHLNMPVLA 126
           S   +   ++Q++IG+ +G + Q   A     G +   QMGLS A   DP S ++  V++
Sbjct: 70  SMLGILTTIEQVVIGLVIGLSFQLIMAVFTLLGFMASSQMGLSMAVMNDPMSGVSSDVVS 129

Query: 127 RIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIGGEPLNSNAFLALTKAGSLIFLNGLML 186
            ++ ++++L+F    GHL    ++  +F + P+GG  +   A   L    + IF   L+L
Sbjct: 130 TLLYIMSILVFFAVEGHLVFNGVMGSSFKSWPVGG-GIPQVALETLPLQVAWIFSAALLL 188

Query: 187 ALPLITLLLTLNLALGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMPLIAPFCEHLFSE 246
           ALP+I   L + +  G LNR+AP  ++F +GF L +  G+ +++ L+  I      L + 
Sbjct: 189 ALPVIFSALVVQIGFGFLNRIAPAFNLFSLGFSLIIVFGLFMLSGLVRYIPEQYVRLTTR 248

Query: 247 IFNLLADIIS 256
           +  +L  +++
Sbjct: 249 VLGMLEQMMA 258