Pairwise Alignments

Query, 308 a.a., flagellar motor protein MotB from Escherichia coli ECRC99

Subject, 321 a.a., Flagellar motor rotation protein MotB from Variovorax sp. SCN45

 Score =  284 bits (726), Expect = 2e-81
 Identities = 152/306 (49%), Positives = 202/306 (66%), Gaps = 6/306 (1%)

Query: 3   NQAHPIIVVKRRKAKSHGAAHGS-WKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61
           ++  P I++K       G  HG  WKIAYADFMTAMMAFFLVMWL+SISSPK+   IAE+
Sbjct: 2   SEGKPQIIIKHVHKGGGGGHHGGGWKIAYADFMTAMMAFFLVMWLLSISSPKQREGIAEH 61

Query: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLRGD 121
           FR PL  A+ GGD+ S S S IPGGG D    +GEV KQ + EE     + +RL +++  
Sbjct: 62  FRMPLRVAMHGGDKASLSNSMIPGGGADVMHVEGEV-KQADAEE---EADATRLAEMKKK 117

Query: 122 LDQLIESDPKLRVLRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAP 181
           LD+LIE  P  +  R  + ID+  EGLR+QI+D++NRPMF   SA V P+MR ILR +AP
Sbjct: 118 LDELIEKSPVFQQFRSQILIDITTEGLRLQIVDTENRPMFELASARVVPHMRAILRELAP 177

Query: 182 VLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGM 241
            LNG+PN+++LSGHTD   Y + ++ Y NWELSADRANASRREL+VGGL  GKVLRV+G+
Sbjct: 178 ALNGLPNKLTLSGHTDAIVY-NNDRSYGNWELSADRANASRRELVVGGLTEGKVLRVIGL 236

Query: 242 AATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVSALEKPEVAPQVSVPT 301
           A +M L    P + +NRRIS+++LN++ ++ I  EN+            P  A   +   
Sbjct: 237 ADSMHLDRAEPRNPINRRISIILLNRRTQERIERENSSDGGSMRVGKLTPAGAAPKAAAA 296

Query: 302 MPSAEP 307
           +P+  P
Sbjct: 297 LPAQTP 302