Pairwise Alignments

Query, 308 a.a., flagellar motor protein MotB from Escherichia coli ECRC99

Subject, 346 a.a., Flagellar motor rotation protein from Pseudomonas putida KT2440

 Score =  225 bits (574), Expect = 1e-63
 Identities = 125/310 (40%), Positives = 184/310 (59%), Gaps = 14/310 (4%)

Query: 9   IVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFR----- 63
           I+VKR K    G   G+WKIA+ADF TAMMAFFLV+WL+S ++P++ I IA YF+     
Sbjct: 7   IIVKRVKRFGGGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYFQDPIGF 66

Query: 64  ----TPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLR 119
               TP    + G   ++  ++  P    + TQ       +  +E + +++E+ RL  L 
Sbjct: 67  SESGTPYVIDLGGSPEMAPDKTINPEVKTEPTQQSPTQLSKDQVETMAEQVERERLELLL 126

Query: 120 GDLDQLIESDPKLRVLRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAI 179
            +L   +E +P+L+  +  +  ++ Q+GLRIQI+D++NRPMF  GSA ++PY  DIL A+
Sbjct: 127 QELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAM 186

Query: 180 APVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVV 239
           A  +  +PN++S+SGHTD  PYA G   Y NWELSA+RANA+RR L+ GG   G+V RVV
Sbjct: 187 ADTIKAVPNKVSISGHTDAKPYA-GTGEYGNWELSANRANAARRALVAGGYPDGQVARVV 245

Query: 240 GMAATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVS----ALEKPEVAP 295
           G A++     + P + VNRRI ++VL K+A++ I  E    +  P +    A      AP
Sbjct: 246 GYASSSLFDRKDPFNPVNRRIDIIVLTKKAQRNIEGEQGAPETPPAAPTAPAAPASGAAP 305

Query: 296 QVSVPTMPSA 305
             S P  P A
Sbjct: 306 GASAPADPGA 315