Pairwise Alignments

Query, 346 a.a., HTH-type transcriptional regulator GalS from Escherichia coli ECRC98

Subject, 339 a.a., Galactose operon repressor, GalR-LacI family of transcriptional regulators from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  176 bits (446), Expect = 8e-49
 Identities = 114/333 (34%), Positives = 185/333 (55%), Gaps = 6/333 (1%)

Query: 1   MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELDYRPNANAQALATQVSD 60
           M T+ DV+R AGVS ATVSRVLN +  V   TR+ V  A+  L YRPN  A++LA + S+
Sbjct: 1   MATMLDVSRHAGVSKATVSRVLNGTGQVKESTRQKVFTAMQALGYRPNLLARSLANRTSN 60

Query: 61  TIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAEKERHAIEVLIRQRCNALI 120
           +IG+VV      +FG+L++     A+ H K +++ + +   E+E+ A+++L  ++C+A+I
Sbjct: 61  SIGLVVSTFDGFYFGSLLRRASRQAESHNKQLIVTDGHDTPEREQKAVQMLADRQCDAII 120

Query: 121 VHSKALSDDELAQFMD--NIPGMVLINRVVPGYTHRCVCLDNLSGARMATRMLLNNGHQR 178
           ++++ + +  +   +D   +P +V+INR V     R +  +  + A  A   L+  GH+ 
Sbjct: 121 LYTRYMDELAILSLIDATEMP-LVIINRNVTQARDRAIFFEQETAAFQAVEYLITQGHRD 179

Query: 179 IGYLSSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGTGTPDMPGGEAAMVELLGRNLQL 238
           I  ++          R AG+  AL++  I    + +  G   +  G  A  ELL   +  
Sbjct: 180 IACITLPVHTPTGTSRVAGYRKALEKYGIPWQPAKVKYGDYTLTRGYDACRELLEEGVTF 239

Query: 239 TAVFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIPIARYTDPQLTTVRYPIASMAKL 298
           +A+FA ND+ A GA  AL+  G+ IP  +S+ GFDD P A + +P L+TV  PI +M   
Sbjct: 240 SALFACNDDTALGAAKALRQAGLRIPQDVSLFGFDDAPGATWLEPGLSTVYLPIEAMIAT 299

Query: 299 ATELALQGAAGNIDPRAS-HCFMPTLVRRHSVA 330
           A + A++ A  N +P A    F  TL+ R SVA
Sbjct: 300 AIDQAVRLA--NSEPVAPIPPFTGTLILRESVA 330