Pairwise Alignments

Query, 346 a.a., HTH-type transcriptional regulator GalS from Escherichia coli ECRC98

Subject, 341 a.a., Anti-activator for CytR-CRP nucleoside utilization regulon from Escherichia coli BL21

 Score =  172 bits (437), Expect = 9e-48
 Identities = 106/307 (34%), Positives = 161/307 (52%)

Query: 3   TIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELDYRPNANAQALATQVSDTI 62
           T++DVA +A VS ATVSR L N   VS  TR  V KA  E+ Y P    + +    S TI
Sbjct: 11  TMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTI 70

Query: 63  GVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAEKERHAIEVLIRQRCNALIVH 122
            V+V D+ D FF  +++ +++ A  H   VLIG+  H+ ++E+  I+++I ++ + +++ 
Sbjct: 71  LVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLL 130

Query: 123 SKALSDDELAQFMDNIPGMVLINRVVPGYTHRCVCLDNLSGARMATRMLLNNGHQRIGYL 182
              L  D   +   N+P MV+ N   P      V +DNL+ A  A   L   GH+RIG +
Sbjct: 131 GSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKRIGCI 190

Query: 183 SSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGTGTPDMPGGEAAMVELLGRNLQLTAVF 242
           +    +     R  G++ AL+   I+    +I  G      G  AM +LL      TAVF
Sbjct: 191 AGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPPTAVF 250

Query: 243 AYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIPIARYTDPQLTTVRYPIASMAKLATEL 302
            ++D MA GAL+  K  G+ +P  LSIIGFD+I + ++ DP LTT+  P   + + A  L
Sbjct: 251 CHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLL 310

Query: 303 ALQGAAG 309
            L    G
Sbjct: 311 LLDQMQG 317