Pairwise Alignments

Query, 260 a.a., histidine ABC transporter substrate-binding protein HisJ from Escherichia coli ECRC98

Subject, 277 a.a., Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  230 bits (587), Expect = 2e-65
 Identities = 123/277 (44%), Positives = 169/277 (61%), Gaps = 19/277 (6%)

Query: 1   MKKLVLSLSLVLAFS---------SATAAFAAIPQ---------NIRIGTDPTYAPFESK 42
           MK L LSLSL+ A +          A AA AA P           +++  DPTY PF  K
Sbjct: 1   MKNLFLSLSLIGAAALVGCGKTEAPAPAAPAAAPAAAPAPAEMPELKVAIDPTYEPFTFK 60

Query: 43  NSQGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQE 102
            + G+  GFD+D+A  LC +I  +C +VE   D++IP L+AKK DAI+SS+SITE+R Q 
Sbjct: 61  TADGKPTGFDVDIADALCAQIKRKCVYVEQVWDSMIPGLQAKKYDAIISSMSITEERLQV 120

Query: 103 IAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIVSY 162
           + FTDK Y   SR+VV K         SLKGK++GVL+G+TQE +      P G+ IV Y
Sbjct: 121 VDFTDKYYFTPSRIVV-KTGTAYTDPASLKGKKIGVLKGSTQEKYAMGELKPAGVSIVPY 179

Query: 163 QGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLR 222
           + QD +Y D+ +GR+D    D+V  + GFL++P G  Y F GP + + K +G G G+ LR
Sbjct: 180 EAQDQVYLDIKSGRLDGTVADQVEVNGGFLRKPEGAGYGFVGPVLNEAKYYGTGVGVALR 239

Query: 223 KEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYG 259
           K +  L++ LN A   +R++G YE +AKKYFDFDVYG
Sbjct: 240 KGETALKDELNAAIKAIRSNGVYETVAKKYFDFDVYG 276