Pairwise Alignments

Query, 166 a.a., fimbrial protein from Escherichia coli ECRC98

Subject, 170 a.a., Minor fimbrial subunit StfE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  152 bits (383), Expect = 4e-42
 Identities = 74/155 (47%), Positives = 104/155 (67%), Gaps = 1/155 (0%)

Query: 13  LCSIVSTPVMAGSKSVAMVLRVLVDAPPPCTVTGASVEFGNVFISKIDGVSYKRPIDYSL 72
           + S VS P+ AGSK+V M L ++V+A PPCTVTG  VEFGNV  +K+DGV+Y++ + Y L
Sbjct: 16  MLSAVSMPLAAGSKTVNMTLTIVVNAAPPCTVTGGEVEFGNVLTTKVDGVNYRQAVGYRL 75

Query: 73  VCNNLAMDDLRLNMQATTTVINGETVIDTGIAGFGIRIQKVSDHSILDLTPGAWLPFNFS 132
            CN    D L+L +Q     INGE+V+ T + G GIR+Q  +D +++      WL F +S
Sbjct: 76  SCNGRVSDYLKLQIQGNAVTINGESVLQTDVDGLGIRLQTATDGALISPGNTQWLSFQYS 135

Query: 133 SGA-LALEAVPVVQSGVSLTAAEFSASATIVVDYQ 166
            G+  A+EA+PV  +GV+LT   F+A AT+VVDYQ
Sbjct: 136 GGSGPAIEAIPVKNNGVTLTGGAFNAGATLVVDYQ 170